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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 384.0
Min RPKM: 0.7
Std RPKM: 85.0
Median RPKM: 78.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
384.0
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
354.2
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
330.1
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
282.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
277.1
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
269.8
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
261.5
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
246.0
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
225.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
222.8
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
216.6
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
210.5
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
210.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
202.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
198.5
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
196.6
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
190.1
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
185.1
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
182.4
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
182.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
179.7
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
178.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
178.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
176.6
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
172.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
167.2
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
167.0
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
166.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
156.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
144.2
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
141.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
140.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
140.6
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
137.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
136.4
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
135.1
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
131.8
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
128.6
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
124.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
121.1
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
114.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
107.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
105.4
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
104.3
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
103.0
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
103.0
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
102.3
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
100.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
99.4
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
97.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
94.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
93.2
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
90.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
88.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
86.5
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
84.8
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
83.8
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
82.0
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
78.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
77.1
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
70.6
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
69.2
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
68.7
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
68.5
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
67.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
56.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
56.7
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
52.1
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
51.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
49.9
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
49.6
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
45.1
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
44.6
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
44.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
42.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
42.3
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
42.0
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
41.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
39.8
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
39.0
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
37.8
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
36.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
33.2
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
31.3
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
31.2
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
28.4
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
28.0
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
26.0
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
26.0
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
22.0
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
21.3
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
19.6
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
19.2
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
18.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
16.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
15.6
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
13.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
13.4
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
12.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
11.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
10.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
9.8
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
9.3
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
8.8
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
8.3
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
8.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
6.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
5.8
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
5.5
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
5.0
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
4.3
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
4.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
3.1
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
2.5
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
2.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
1.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
0.7
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.