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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1.5
Min RPKM: 0.2
Std RPKM: 0.2
Median RPKM: 0.5
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
1.5
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
1.2
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
1.2
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
1.1
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
1.0
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
0.9
GTEX-13O61-1326-SM-5KM31
60-69 years, male
0.9
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
0.9
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
0.9
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
0.9
GTEX-1192X-2526-SM-59868
50-59 years, male
0.8
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
0.8
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
0.8
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
0.8
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
0.8
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
0.8
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
0.7
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
0.7
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
0.7
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
0.7
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
0.7
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
0.7
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
0.7
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
0.7
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
0.7
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
0.7
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
0.7
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
0.7
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
0.6
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
0.6
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
0.6
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
0.6
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
0.6
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
0.6
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
0.6
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
0.6
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
0.6
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
0.6
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
0.6
GTEX-117YX-0326-SM-5GICL
50-59 years, male
0.5
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
0.5
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
0.5
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
0.5
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
0.5
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
0.5
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
0.5
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
0.5
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
0.5
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
0.5
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
0.5
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
0.5
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
0.5
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
0.4
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
0.4
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
0.4
GTEX-13111-1426-SM-5DUW3
50-59 years, male
0.4
GTEX-13113-1226-SM-5EGHT
60-69 years, female
0.4
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
0.4
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
0.4
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
0.4
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
0.4
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
0.4
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
0.4
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
0.4
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
0.4
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
0.4
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
0.4
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
0.4
GTEX-ZTSS-0926-SM-59865
40-49 years, male
0.4
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
0.4
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
0.4
GTEX-1122O-1326-SM-5H11F
60-69 years, female
0.3
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
0.3
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
0.3
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
0.3
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
0.3
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
0.3
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
0.3
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
0.3
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
0.3
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
0.3
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
0.3
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
0.3
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
0.3
GTEX-111YS-1426-SM-5GID8
60-69 years, male
0.2
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
0.2
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
0.2
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
0.2
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 85
