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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 191.6
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 264.7
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 136
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 159.2
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 162.5
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 195.2
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 142.2
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 313.8
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 239.1
Min RPKM: 29.6
Std RPKM: 42.9
Median RPKM: 120.4
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
239.1
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
236.5
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
232.9
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
231.3
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
226.0
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
216.8
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
202.5
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
187.4
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
183.7
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
180.1
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
177.7
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
173.0
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
172.2
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
172.0
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
169.9
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
164.2
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
163.2
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
163.0
GTEX-QEL4-1226-SM-447A4
50-59 years, male
162.2
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
162.2
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
160.9
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
159.3
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
156.6
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
153.7
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
152.5
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
151.5
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
150.9
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
150.1
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
149.9
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
149.5
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
149.5
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
148.6
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
148.6
GTEX-Q734-0326-SM-48U15
40-49 years, female
146.0
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
143.6
GTEX-R53T-0326-SM-48FEC
50-59 years, female
143.5
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
143.2
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
142.7
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
142.2
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
141.7
GTEX-S32W-1926-SM-4AD63
50-59 years, female
140.9
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
140.3
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
138.3
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
137.5
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
136.1
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
135.4
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
131.6
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
129.4
GTEX-P78B-1326-SM-3P611
40-49 years, female
129.0
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
126.7
GTEX-X261-1726-SM-4PQYT
50-59 years, male
126.6
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
126.3
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
125.0
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
124.4
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
123.9
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
123.5
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
122.7
GTEX-RN64-1826-SM-48FDV
50-59 years, male
122.7
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
121.4
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
120.4
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
119.8
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
119.3
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
118.8
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
118.6
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
118.4
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
118.3
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
118.2
GTEX-YECK-1926-SM-4W21H
60-69 years, male
117.4
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
117.2
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
115.3
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
114.9
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
113.7
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
112.9
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
110.5
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
106.6
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
104.6
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
104.4
GTEX-1399T-0826-SM-5IFES
60-69 years, male
103.9
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
103.3
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
102.8
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
102.5
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
100.8
GTEX-RU72-1426-SM-46MUF
50-59 years, female
100.8
GTEX-13113-1326-SM-5GCOI
60-69 years, female
99.0
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
98.7
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
97.0
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
97.0
GTEX-13112-1426-SM-5EGH8
50-59 years, male
95.9
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
95.4
GTEX-11ZUS-2526-SM-59872
30-39 years, male
94.7
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
94.6
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
94.2
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
94.0
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
93.4
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
93.2
GTEX-REY6-1226-SM-48FDR
60-69 years, male
91.1
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
87.9
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
86.7
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
85.8
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
85.6
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
85.5
GTEX-QESD-2026-SM-447BI
20-29 years, male
84.4
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
80.3
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
79.8
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
79.1
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
77.4
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
71.6
GTEX-11GSP-0626-SM-5986T
60-69 years, female
70.4
GTEX-12696-0826-SM-5EGGE
60-69 years, male
70.0
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
66.4
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
64.7
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
60.4
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
58.3
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
55.3
GTEX-S33H-1626-SM-4AD68
30-39 years, male
44.6
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
40.5
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
32.5
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
32.1
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
29.6
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
