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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1849.0
Min RPKM: 173.3
Std RPKM: 283.0
Median RPKM: 392.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
1849.0
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
1792.8
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
1297.7
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
1058.8
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
891.8
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
863.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
786.8
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
781.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
763.8
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
762.7
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
762.6
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
727.6
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
718.4
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
713.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
693.0
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
689.8
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
679.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
659.2
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
633.7
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
611.5
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
592.6
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
590.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
590.0
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
574.1
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
565.8
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
563.6
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
562.4
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
541.6
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
539.0
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
537.7
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
519.3
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
508.5
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
497.4
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
479.1
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
472.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
468.7
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
467.4
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
461.9
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
443.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
441.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
437.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
434.1
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
420.9
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
413.0
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
406.8
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
399.8
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
395.0
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
389.2
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
388.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
386.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
385.8
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
381.0
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
378.5
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
378.0
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
372.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
371.1
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
370.5
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
370.1
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
365.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
360.9
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
355.4
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
353.5
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
343.9
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
343.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
342.5
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
333.2
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
327.2
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
323.1
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
312.9
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
311.4
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
309.3
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
307.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
307.3
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
304.2
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
301.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
287.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
279.3
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
276.0
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
272.0
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
268.4
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
267.9
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
266.3
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
255.8
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
251.2
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
221.0
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
215.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
207.5
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
204.8
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
204.6
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
202.5
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
195.2
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
181.0
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
180.5
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
173.3
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.