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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 53.3
Min RPKM: 0.3
Std RPKM: 13.1
Median RPKM: 18.5
GTEX-1122O-1326-SM-5H11F
60-69 years, female
53.3
GTEX-13FTW-2026-SM-5IJE2
40-49 years, male
45.3
GTEX-XUZC-1426-SM-4BRV3
30-39 years, female
43.6
GTEX-YF7O-1826-SM-5IFIU
50-59 years, male
41.5
GTEX-Y9LG-1626-SM-5IFHM
30-39 years, male
40.0
GTEX-YEC4-1726-SM-4W21E
40-49 years, male
39.4
GTEX-ZLV1-1126-SM-4WWBW
60-69 years, female
39.4
GTEX-11I78-1126-SM-5A5K5
50-59 years, female
38.7
GTEX-13D11-0726-SM-5LZZB
50-59 years, female
37.6
GTEX-YB5E-1526-SM-5IFIE
40-49 years, male
36.5
GTEX-ZZ64-0526-SM-5GZXM
20-29 years, male
36.0
GTEX-11DXX-1626-SM-5H11H
60-69 years, female
33.7
GTEX-1399S-2026-SM-5KM4B
30-39 years, female
33.0
GTEX-ZTX8-0526-SM-59HLD
20-29 years, male
32.8
GTEX-14DAR-1426-SM-5RQIR
50-59 years, male
32.5
GTEX-XXEK-1026-SM-4BRUW
50-59 years, male
32.5
GTEX-14E6E-1626-SM-5RQI7
30-39 years, male
32.2
GTEX-11EQ9-1326-SM-5985X
30-39 years, male
32.0
GTEX-ZTSS-0926-SM-59865
40-49 years, male
31.7
GTEX-ZPCL-1726-SM-57WEO
60-69 years, female
31.1
GTEX-XGQ4-1326-SM-4GIDU
50-59 years, male
30.8
GTEX-111YS-1426-SM-5GID8
60-69 years, male
29.9
GTEX-ZYWO-1526-SM-5SIAL
40-49 years, female
28.9
GTEX-ZYFG-2026-SM-5E43Y
60-69 years, female
28.2
GTEX-13CF3-1226-SM-5LZXN
60-69 years, female
27.4
GTEX-145LT-1026-SM-5LU9O
40-49 years, male
27.3
GTEX-ZVZP-1826-SM-5GZXB
50-59 years, male
27.3
GTEX-133LE-1426-SM-5IFH1
20-29 years, female
26.8
GTEX-11P7K-1626-SM-5GU63
30-39 years, male
25.8
GTEX-ZA64-1226-SM-5HL7B
20-29 years, male
25.5
GTEX-13PL7-2626-SM-5IFH4
60-69 years, female
24.4
GTEX-131XF-1326-SM-5GCMQ
60-69 years, male
23.9
GTEX-VJYA-0926-SM-4KL1N
60-69 years, male
23.5
GTEX-X5EB-1626-SM-4E3IV
40-49 years, male
21.8
GTEX-ZTPG-2626-SM-57WFX
20-29 years, female
21.4
GTEX-13113-1226-SM-5EGHT
60-69 years, female
21.0
GTEX-ZXES-1526-SM-5NQ95
30-39 years, female
20.6
GTEX-XBED-1426-SM-4AT4G
60-69 years, male
20.4
GTEX-ZVT2-2126-SM-5NQ93
50-59 years, female
20.0
GTEX-XAJ8-0526-SM-47JYK
40-49 years, male
19.3
GTEX-11DXZ-1326-SM-5H11X
50-59 years, male
19.1
GTEX-ZPIC-2326-SM-57WDW
40-49 years, female
19.1
GTEX-WFJO-0926-SM-4LVM2
30-39 years, male
18.8
GTEX-ZEX8-1826-SM-57WBH
50-59 years, male
18.6
GTEX-WQUQ-2426-SM-4MVNW
60-69 years, male
18.5
GTEX-ZVP2-1726-SM-5GU5P
50-59 years, male
18.0
GTEX-13FH7-1226-SM-5IJFK
50-59 years, female
17.5
GTEX-139T6-1026-SM-5IJGC
50-59 years, male
17.2
GTEX-11P82-0826-SM-5P9GU
20-29 years, male
16.7
GTEX-139YR-2226-SM-5IFFW
50-59 years, male
15.5
GTEX-Y114-1426-SM-4TT6W
50-59 years, female
14.9
GTEX-11XUK-1426-SM-5EQMG
40-49 years, female
14.2
GTEX-13O61-1326-SM-5KM31
60-69 years, male
13.1
GTEX-ZLFU-1526-SM-4WWBT
40-49 years, male
13.0
GTEX-12BJ1-1926-SM-5HL9Z
60-69 years, male
12.6
GTEX-WH7G-1626-SM-4LVMY
40-49 years, male
12.6
GTEX-11NSD-1726-SM-5N9C3
20-29 years, male
12.5
GTEX-1399R-2026-SM-5K7WN
30-39 years, male
12.4
GTEX-13RTK-0826-SM-5Q5C6
20-29 years, male
12.1
GTEX-WFG7-1726-SM-4LVME
20-29 years, male
11.6
GTEX-Z9EW-0926-SM-5CVMM
40-49 years, male
11.0
GTEX-WFG8-1626-SM-4LVMB
20-29 years, male
10.6
GTEX-1399U-2126-SM-5IFEZ
50-59 years, female
9.2
GTEX-Y5LM-1626-SM-4VDTB
40-49 years, female
7.5
GTEX-13O21-1026-SM-5IJDU
50-59 years, male
6.7
GTEX-X15G-1426-SM-4PQZK
50-59 years, female
6.3
GTEX-ZQG8-2526-SM-57WEQ
60-69 years, female
6.2
GTEX-Y3IK-1726-SM-4YCCR
50-59 years, female
5.8
GTEX-131XG-1726-SM-5LZUR
50-59 years, female
5.3
GTEX-ZP4G-1626-SM-57WGD
20-29 years, female
5.1
GTEX-11VI4-1626-SM-5EQKO
40-49 years, female
4.7
GTEX-WRHK-1026-SM-4MVOD
20-29 years, female
4.4
GTEX-111CU-1326-SM-5NQ8L
50-59 years, male
3.9
GTEX-145ME-0926-SM-5O9AR
40-49 years, female
2.6
GTEX-UPK5-2026-SM-4JBIM
40-49 years, male
2.1
GTEX-VUSG-1726-SM-4KKZL
50-59 years, male
2.1
GTEX-ZF2S-1726-SM-57WFT
50-59 years, female
2.0
GTEX-13OVI-1926-SM-5IJCG
60-69 years, female
1.7
GTEX-13QBU-1926-SM-5IJEW
40-49 years, female
1.7
GTEX-ZQUD-0926-SM-57WE3
30-39 years, male
1.7
GTEX-117YX-0326-SM-5GICL
50-59 years, male
1.6
GTEX-12WSK-1526-SM-5CVNO
40-49 years, female
1.5
GTEX-XMK1-1826-SM-4B66F
40-49 years, male
1.4
GTEX-1192X-2526-SM-59868
50-59 years, male
1.1
GTEX-ZC5H-2326-SM-4WAYT
40-49 years, female
0.8
GTEX-13111-1426-SM-5DUW3
50-59 years, male
0.6
GTEX-148VJ-2226-SM-5NQ9M
70-79 years, male
0.6
GTEX-WEY5-1526-SM-4LMJF
40-49 years, female
0.3
Show all
SMALL INTESTINE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.