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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 175.7
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 156.3
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 42.5
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 211.2
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 212.8
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 106.3
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 381.6
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 256.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 389.2
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 323.8
Min RPKM: 11.9
Std RPKM: 64.1
Median RPKM: 159.8
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
323.8
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
315.0
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
312.5
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
306.4
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
305.4
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
288.7
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
284.4
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
273.7
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
270.9
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
270.1
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
269.6
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
268.3
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
265.8
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
265.6
GTEX-11OF3-1826-SM-5987N
60-69 years, male
259.4
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
257.7
GTEX-13112-0226-SM-5P9IV
50-59 years, male
253.3
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
249.9
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
249.5
GTEX-117XS-2026-SM-5GID1
60-69 years, male
248.3
GTEX-REY6-0126-SM-48FDT
60-69 years, male
244.9
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
242.9
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
238.9
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
238.0
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
235.3
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
233.1
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
232.4
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
223.3
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
223.2
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
223.1
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
219.9
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
217.2
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
216.3
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
214.4
GTEX-12696-0226-SM-5EGL3
60-69 years, male
213.7
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
212.3
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
210.7
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
209.9
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
206.6
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
206.1
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
205.8
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
204.3
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
202.8
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
201.5
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
200.5
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
197.9
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
194.8
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
194.1
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
192.1
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
192.0
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
191.5
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
191.0
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
190.6
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
190.0
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
189.7
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
189.5
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
187.4
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
187.0
GTEX-X261-2326-SM-4PQYU
50-59 years, male
187.0
GTEX-S95S-1126-SM-4B64E
60-69 years, male
186.1
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
186.1
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
184.4
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
183.7
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
178.7
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
178.0
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
177.9
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
177.2
GTEX-13111-1526-SM-5EGJX
50-59 years, male
173.9
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
173.0
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
170.0
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
169.7
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
169.4
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
168.3
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
167.4
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
167.1
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
166.9
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
166.6
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
166.4
GTEX-QLQW-1026-SM-447A9
30-39 years, male
165.3
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
164.7
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
164.2
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
164.2
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
162.1
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
161.9
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
161.0
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
160.0
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
159.7
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
156.1
GTEX-R55D-0126-SM-48FEL
50-59 years, male
155.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
153.8
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
152.6
GTEX-R55C-1426-SM-48FED
40-49 years, male
152.4
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
152.3
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
151.8
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
151.8
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
149.1
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
148.8
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
148.6
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
147.5
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
147.0
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
146.7
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
143.0
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
142.7
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
141.8
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
141.3
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
140.2
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
139.6
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
135.3
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
135.2
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
131.3
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
130.3
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
129.4
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
128.8
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
128.3
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
128.1
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
127.0
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
125.0
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
122.6
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
121.6
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
120.8
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
119.6
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
119.3
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
117.3
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
116.9
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
114.6
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
114.1
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
113.9
GTEX-Y111-2426-SM-4TT23
50-59 years, male
113.6
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
111.3
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
111.2
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
110.0
GTEX-RN64-2326-SM-48FDW
50-59 years, male
109.9
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
106.0
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
105.1
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
103.2
GTEX-S33H-0126-SM-4AD62
30-39 years, male
102.3
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
101.4
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
101.4
GTEX-V955-1926-SM-4KL1L
60-69 years, male
99.8
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
99.0
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
98.5
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
98.3
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
97.0
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
93.1
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
93.0
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
92.9
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
92.2
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
92.1
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
92.0
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
91.1
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
90.8
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
89.5
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
89.0
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
84.4
GTEX-11DXZ-2126-SM-59881
50-59 years, male
84.2
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
79.4
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
78.8
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
76.0
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
74.0
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
73.0
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
71.7
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
69.4
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
68.7
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
66.1
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
65.1
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
57.9
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
56.2
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
54.1
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
53.6
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
48.3
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
17.1
GTEX-XPT6-1626-SM-4B655
20-29 years, male
11.9
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.