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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 255.7
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 226.5
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 168.4
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 272
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 207.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 210.6
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 239.3
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 330.3
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 140.6
Min RPKM: 5.2
Std RPKM: 26.9
Median RPKM: 72.9
GTEX-R53T-0326-SM-48FEC
50-59 years, female
140.6
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
129.2
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
120.3
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
115.9
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
114.9
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
114.5
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
112.6
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
108.8
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
107.4
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
104.3
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
101.1
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
99.9
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
98.7
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
98.3
GTEX-1399T-0826-SM-5IFES
60-69 years, male
96.5
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
95.2
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
95.2
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
95.2
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
92.8
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
92.7
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
92.3
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
91.7
GTEX-RN64-1826-SM-48FDV
50-59 years, male
91.1
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
91.0
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
90.1
GTEX-QESD-2026-SM-447BI
20-29 years, male
90.0
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
88.0
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
87.8
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
87.7
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
87.0
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
86.4
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
86.4
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
85.3
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
84.9
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
84.5
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
84.1
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
83.1
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
83.1
GTEX-P78B-1326-SM-3P611
40-49 years, female
82.4
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
82.3
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
82.2
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
81.1
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
80.1
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
80.1
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
79.8
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
79.6
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
79.6
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
78.9
GTEX-13112-1426-SM-5EGH8
50-59 years, male
78.9
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
78.5
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
76.6
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
76.3
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
75.4
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
75.2
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
75.0
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
74.9
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
74.9
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
74.8
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
74.6
GTEX-YECK-1926-SM-4W21H
60-69 years, male
72.9
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
72.4
GTEX-11ZUS-2526-SM-59872
30-39 years, male
72.3
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
71.2
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
70.6
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
69.6
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
69.2
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
68.3
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
68.1
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
67.7
GTEX-Q734-0326-SM-48U15
40-49 years, female
67.4
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
66.6
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
66.5
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
65.3
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
65.2
GTEX-13113-1326-SM-5GCOI
60-69 years, female
64.9
GTEX-X261-1726-SM-4PQYT
50-59 years, male
63.5
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
63.3
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
61.7
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
61.1
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
61.0
GTEX-RU72-1426-SM-46MUF
50-59 years, female
60.6
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
60.5
GTEX-11GSP-0626-SM-5986T
60-69 years, female
60.3
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
60.3
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
60.2
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
58.3
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
57.9
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
52.8
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
52.0
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
51.3
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
50.4
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
47.8
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
47.4
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
46.6
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
46.1
GTEX-12696-0826-SM-5EGGE
60-69 years, male
45.7
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
45.3
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
44.6
GTEX-QEL4-1226-SM-447A4
50-59 years, male
43.8
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
40.7
GTEX-REY6-1226-SM-48FDR
60-69 years, male
39.0
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
37.1
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
36.4
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
36.1
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
34.3
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
32.1
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
28.8
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
28.3
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
28.2
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
27.0
GTEX-S33H-1626-SM-4AD68
30-39 years, male
26.3
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
25.7
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
19.2
GTEX-S32W-1926-SM-4AD63
50-59 years, female
17.8
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
17.0
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
11.8
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
9.7
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
6.8
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
5.2
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
