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COLON - Expression summary
Protein expressioni
N/A
RNA expressioni
HPA:130.9TPM
GTEx:108.2RPKM
FANTOM5:117.3Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 130.9
overview Male, age 54 Sample 1
TPM: 131
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 134.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 160.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 152.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 67
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 138.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 130.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 138.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 107.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 151.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 152.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 142.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 94
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 108.2
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 83.1
Samples: 149

Max RPKM: 130.7
Min RPKM: 31.3
Std RPKM: 15.3
Median RPKM: 84.6
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 130.7
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 118.3
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 117.9
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 115.9
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 115.5
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 110.2
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 109.2
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 107.9
GTEX-131YS-2926-SM-5EGKI 60-69 years, female 104.8
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 104.8
Show all
Colon - Transverse
RPKM: 127.2
Samples: 196

Max RPKM: 262.4
Min RPKM: 34.4
Std RPKM: 45.7
Median RPKM: 129.1
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 262.4
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 258.6
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 252.0
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 248.0
GTEX-Q2AI-0926-SM-48U1F 40-49 years, male 231.0
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 213.8
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 204.5
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 203.6
GTEX-QMRM-1226-SM-447C6 50-59 years, male 203.0
GTEX-WFON-1426-SM-4LVMT 40-49 years, male 196.0
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 117.3
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 84.3
FF:10014-101C5 62,83,84 years, mixed 117.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.