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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 207.7
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 231.3
Min RPKM: 53.8
Std RPKM: 24.7
Median RPKM: 133.7
GTEX-144FL-3026-SM-5O99C
50-59 years, male
231.3
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
174.9
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
174.6
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
170.6
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
169.5
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
166.9
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
158.1
GTEX-X585-3026-SM-46MWF
50-59 years, male
157.4
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
156.7
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
155.9
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
155.2
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
154.4
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
153.5
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
153.2
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
152.9
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
152.5
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
151.5
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
151.4
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
150.8
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
150.7
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
150.5
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
150.3
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
148.8
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
148.8
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
148.7
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
148.5
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
147.6
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
146.6
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
146.5
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
146.4
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
146.1
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
145.2
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
143.9
GTEX-145MF-2726-SM-5O995
50-59 years, male
143.9
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
142.1
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
142.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
141.9
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
141.7
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
141.3
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
140.4
GTEX-11PRG-2926-SM-5987A
50-59 years, male
140.1
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
139.5
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
139.4
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
138.8
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
138.7
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
138.0
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
137.9
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
137.8
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
137.3
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
137.2
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
136.7
GTEX-WL46-2926-SM-3LK82
50-59 years, male
135.9
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
135.0
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
135.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
134.3
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
134.2
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
133.8
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
133.7
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
133.5
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
133.5
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
132.9
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
132.9
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
132.0
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
131.9
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
131.8
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
131.7
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
131.4
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
131.3
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
130.9
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
130.6
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
129.9
GTEX-1128S-2726-SM-5H12C
60-69 years, female
129.6
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
129.6
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
129.5
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
129.0
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
128.7
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
127.5
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
127.3
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
126.8
GTEX-11GSP-3226-SM-5986O
60-69 years, female
125.0
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
121.3
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
119.7
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
119.3
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
118.0
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
117.8
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
115.7
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
115.6
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
115.5
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
114.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
113.7
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
111.3
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
110.8
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
109.7
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
109.7
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
109.0
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
108.3
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
107.3
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
105.8
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
99.3
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
97.8
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
97.5
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
96.9
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
94.0
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
92.7
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
88.5
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
87.9
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
87.5
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
84.3
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
84.2
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
84.1
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
83.1
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
82.8
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
72.6
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
53.8
Show all
Brain - Frontal Cortex (BA9) RPKM: 112.4
Samples: 108
Max RPKM: 179.5
Min RPKM: 49.6
Std RPKM: 28.0
Median RPKM: 116.5
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
179.5
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
179.4
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
171.4
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
165.8
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
164.0
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
150.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
149.9
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
148.5
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
147.8
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
146.9
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
144.1
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
143.4
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
142.3
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
142.1
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
139.4
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
138.6
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
138.4
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
138.1
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
138.1
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
138.0
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
137.9
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
136.3
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
136.1
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
135.9
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
135.2
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
134.9
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
133.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
132.4
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
132.3
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
129.4
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
129.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
128.9
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
126.3
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
125.7
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
125.6
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
125.2
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
124.4
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
123.5
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
122.9
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
122.6
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
122.4
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
121.0
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
120.5
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
120.4
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
120.3
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
120.3
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
120.1
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
119.3
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
119.1
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
118.6
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
118.3
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
117.2
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
116.8
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
116.5
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
116.4
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
115.5
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
115.3
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
115.0
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
114.9
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
114.9
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
113.6
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
111.5
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
110.2
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
110.1
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
109.8
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
108.6
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
107.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
106.6
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
104.7
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
104.6
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
104.0
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
103.9
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
102.9
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
101.3
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
101.3
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
95.9
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
94.9
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
94.7
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
93.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
92.3
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
90.3
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
89.4
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
89.3
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
89.1
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
87.3
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
87.1
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
85.4
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
84.4
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
84.3
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
83.5
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
83.2
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
81.4
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
79.8
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
78.9
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
78.6
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
74.1
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
72.2
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
71.6
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
67.3
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
65.2
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
64.5
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
63.3
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
63.2
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
62.1
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
61.4
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
61.4
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
56.1
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
49.6
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.