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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 75.5
Min RPKM: 3.2
Std RPKM: 17.4
Median RPKM: 22.8
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
75.5
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
60.3
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
60.0
GTEX-S341-1226-SM-4AD5S
40-49 years, female
59.6
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
57.0
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
56.3
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
51.8
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
51.4
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
50.0
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
48.7
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
48.5
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
46.0
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
45.8
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
44.8
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
43.9
GTEX-11I78-2026-SM-5987C
50-59 years, female
43.0
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
42.5
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
42.4
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
42.2
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
41.0
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
40.4
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
39.9
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
39.1
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
38.5
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
37.5
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
36.9
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
36.5
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
35.9
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
35.8
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
35.4
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
35.1
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
33.6
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
30.0
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
29.6
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
29.6
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
29.1
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
28.8
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
28.3
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
27.6
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
27.5
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
26.4
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
26.2
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
25.6
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
25.5
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
25.1
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
24.3
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
23.3
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
22.9
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
22.7
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
21.1
GTEX-QCQG-1226-SM-48U23
50-59 years, female
19.1
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
18.8
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
17.1
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
16.9
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
16.7
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
16.7
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
15.7
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
13.5
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
13.3
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
12.5
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
12.5
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
12.1
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
11.6
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
10.0
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
9.9
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
9.8
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
9.8
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
9.5
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
8.3
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
7.8
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
7.7
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
7.6
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
7.1
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
7.0
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
6.9
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
6.1
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
6.1
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
6.1
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
5.8
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
5.8
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
5.7
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
5.6
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
5.5
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
5.4
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
5.2
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
5.2
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
5.2
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
4.8
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
4.8
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
4.8
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
4.8
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
4.4
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
4.4
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
3.9
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
3.8
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
3.2
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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