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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 70
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 278.4
Min RPKM: 0.9
Std RPKM: 56.3
Median RPKM: 164.1
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
278.4
GTEX-WL46-2926-SM-3LK82
50-59 years, male
267.6
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
255.7
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
250.2
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
250.0
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
248.6
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
248.5
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
242.0
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
241.9
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
238.3
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
236.6
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
234.4
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
232.6
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
229.7
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
229.3
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
229.2
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
228.2
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
225.8
GTEX-11PRG-2926-SM-5987A
50-59 years, male
223.6
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
222.4
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
222.2
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
213.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
212.6
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
210.4
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
209.8
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
209.6
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
207.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
204.5
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
204.4
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
203.9
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
199.7
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
197.6
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
196.8
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
196.4
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
195.0
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
194.5
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
194.1
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
193.8
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
192.8
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
192.7
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
192.4
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
183.0
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
182.7
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
182.4
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
182.2
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
181.5
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
179.5
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
178.6
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
178.1
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
175.5
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
173.3
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
171.7
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
170.1
GTEX-X585-3026-SM-46MWF
50-59 years, male
170.1
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
166.6
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
164.9
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
164.3
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
164.0
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
162.0
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
161.4
GTEX-145MF-2726-SM-5O995
50-59 years, male
161.2
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
158.2
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
157.7
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
157.0
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
156.5
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
154.8
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
152.5
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
151.7
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
150.0
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
148.5
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
145.9
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
144.3
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
143.3
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
141.8
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
141.3
GTEX-1128S-2726-SM-5H12C
60-69 years, female
139.5
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
138.5
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
138.3
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
137.8
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
133.6
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
132.5
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
131.3
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
125.3
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
124.8
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
122.9
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
122.9
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
122.2
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
121.9
GTEX-144FL-3026-SM-5O99C
50-59 years, male
116.9
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
113.4
GTEX-11GSP-3226-SM-5986O
60-69 years, female
110.6
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
109.3
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
106.9
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
103.1
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
103.0
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
102.8
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
102.5
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
100.4
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
97.4
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
91.1
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
89.8
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
89.4
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
80.8
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
80.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
79.9
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
77.4
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
72.3
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
67.3
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
64.3
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
64.2
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
52.0
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
46.7
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
43.4
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
0.9
Show all
Brain - Frontal Cortex (BA9) RPKM: 148.6
Samples: 108
Max RPKM: 314.4
Min RPKM: 42.3
Std RPKM: 55.9
Median RPKM: 139.5
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
314.4
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
305.6
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
280.5
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
268.5
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
254.7
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
252.8
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
241.7
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
240.5
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
238.2
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
232.8
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
231.1
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
224.6
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
223.6
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
222.3
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
217.3
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
208.9
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
208.2
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
206.6
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
200.4
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
197.0
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
192.9
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
192.9
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
187.3
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
184.5
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
184.4
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
183.5
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
182.2
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
180.3
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
175.9
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
173.7
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
172.4
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
170.4
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
168.3
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
165.0
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
164.0
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
163.7
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
163.2
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
162.4
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
161.9
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
161.4
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
160.7
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
156.8
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
156.7
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
153.8
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
151.6
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
149.9
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
148.2
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
147.8
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
147.5
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
147.1
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
146.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
143.0
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
141.9
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
139.6
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
139.3
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
138.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
138.6
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
138.6
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
138.4
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
134.7
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
133.2
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
132.7
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
132.2
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
131.1
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
130.4
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
129.4
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
129.1
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
128.1
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
126.3
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
126.0
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
126.0
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
122.9
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
120.8
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
120.6
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
119.0
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
117.8
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
117.7
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
115.8
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
114.7
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
113.6
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
112.2
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
111.8
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
111.4
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
107.0
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
105.9
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
105.4
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
104.6
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
104.4
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
104.2
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
99.9
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
97.7
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
95.4
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
95.2
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
93.9
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
91.2
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
90.0
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
82.1
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
76.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
72.7
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
70.6
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
64.8
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
63.9
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
63.7
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
60.7
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
53.4
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
51.5
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
44.8
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
42.3
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.