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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 527.2
Min RPKM: 59.7
Std RPKM: 110.8
Median RPKM: 298.6
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
527.2
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
526.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
513.7
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
508.7
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
484.7
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
470.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
467.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
441.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
438.8
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
433.2
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
424.2
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
421.2
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
419.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
411.6
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
411.1
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
407.8
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
406.8
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
406.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
395.4
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
386.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
386.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
379.4
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
376.1
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
375.3
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
375.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
375.1
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
369.9
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
367.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
366.1
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
358.3
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
358.2
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
355.1
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
352.1
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
349.0
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
348.2
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
346.7
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
346.6
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
346.6
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
341.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
339.3
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
336.6
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
335.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
334.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
330.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
330.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
329.8
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
329.1
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
325.2
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
320.2
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
318.9
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
314.9
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
312.0
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
309.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
308.1
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
307.3
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
300.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
299.8
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
298.9
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
298.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
294.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
293.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
286.1
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
285.7
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
279.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
276.7
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
275.8
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
275.0
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
274.5
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
274.0
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
272.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
266.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
263.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
262.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
261.1
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
260.9
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
259.5
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
258.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
256.9
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
249.2
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
239.4
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
236.0
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
233.0
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
230.1
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
225.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
220.8
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
210.9
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
205.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
205.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
197.3
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
193.2
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
184.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
180.2
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
176.2
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
175.3
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
168.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
167.5
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
167.5
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
152.7
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
143.5
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
136.0
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
133.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
127.4
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
123.8
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
123.5
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
119.2
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
119.2
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
118.0
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
115.1
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
104.7
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
102.8
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
101.8
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
100.5
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
98.3
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
98.1
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
95.4
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
90.2
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
59.7
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.