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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 201.5
Min RPKM: 67.3
Std RPKM: 26.4
Median RPKM: 108.0
GTEX-ZQG8-2126-SM-4YCF1
60-69 years, female
201.5
GTEX-Y5V6-2226-SM-4VDTC
60-69 years, male
170.7
GTEX-ZE7O-2926-SM-51MSG
50-59 years, female
165.1
GTEX-146FR-1226-SM-5SIA7
60-69 years, female
164.5
GTEX-1117F-3026-SM-5GZYU
60-69 years, female
152.4
GTEX-13OVI-2326-SM-5KM47
60-69 years, female
147.1
GTEX-X5EB-1726-SM-4E3J7
40-49 years, male
143.2
GTEX-XGQ4-2626-SM-4AT6B
50-59 years, male
141.9
GTEX-1339X-2326-SM-5HL5B
40-49 years, male
137.6
GTEX-1314G-2026-SM-5LZUM
30-39 years, male
132.6
GTEX-Y5LM-1826-SM-4VDT9
40-49 years, female
129.3
GTEX-ZA64-1726-SM-5CVMF
20-29 years, male
124.0
GTEX-13JVG-2926-SM-5J2N9
60-69 years, male
122.9
GTEX-1445S-2926-SM-5O993
60-69 years, male
122.8
GTEX-13G51-2426-SM-5LZY8
60-69 years, male
122.4
GTEX-Y111-2626-SM-4TT24
50-59 years, male
122.3
GTEX-YF7O-2226-SM-5CVN8
50-59 years, male
122.0
GTEX-13QJC-2326-SM-5Q5CD
60-69 years, female
121.7
GTEX-13NYC-2626-SM-5K7VN
60-69 years, male
120.4
GTEX-XMK1-2626-SM-4B65R
40-49 years, male
120.0
GTEX-WOFM-2126-SM-4OOSR
20-29 years, male
118.4
GTEX-X15G-2126-SM-4PQZR
50-59 years, female
118.2
GTEX-XV7Q-2426-SM-4BRV8
40-49 years, female
117.9
GTEX-11EQ9-2026-SM-5P9JI
30-39 years, male
114.7
GTEX-Y3I4-1926-SM-4TT8L
50-59 years, male
112.9
GTEX-13113-1526-SM-5EGHV
60-69 years, female
112.8
GTEX-ZP4G-1926-SM-57WDZ
20-29 years, female
110.7
GTEX-ZT9W-2126-SM-51MSF
50-59 years, male
109.5
GTEX-13111-2326-SM-5LZUQ
50-59 years, male
108.0
GTEX-11P81-2026-SM-5P9GT
30-39 years, female
107.5
GTEX-12WSL-2126-SM-5GCNG
50-59 years, male
106.9
GTEX-12WSN-2226-SM-5DUXT
40-49 years, male
106.1
GTEX-131XF-2826-SM-5EGKH
60-69 years, male
105.7
GTEX-YB5K-1726-SM-5IFIZ
40-49 years, female
105.1
GTEX-145ME-1626-SM-5RQI3
40-49 years, female
100.0
GTEX-11P82-0926-SM-5986X
20-29 years, male
99.5
GTEX-ZPU1-2326-SM-57WEP
40-49 years, male
98.1
GTEX-ZQUD-2126-SM-51MSY
30-39 years, male
98.1
GTEX-ZXG5-2826-SM-5NQ8T
60-69 years, male
97.6
GTEX-14B4R-1426-SM-5Q5CG
30-39 years, male
97.1
GTEX-X261-2426-SM-4PQZU
50-59 years, male
93.3
GTEX-13NYB-2426-SM-5IFF4
40-49 years, male
91.7
GTEX-WFJO-2026-SM-4LVM3
30-39 years, male
91.1
GTEX-ZC5H-2726-SM-5KLZW
40-49 years, female
90.9
GTEX-111FC-2926-SM-5GZY7
60-69 years, male
88.3
GTEX-13O21-1926-SM-5MR39
50-59 years, male
88.2
GTEX-11WQK-2926-SM-5EQKT
50-59 years, male
88.1
GTEX-13CF2-2426-SM-5LZYL
60-69 years, male
87.5
GTEX-X3Y1-1926-SM-4PQZO
40-49 years, male
86.3
GTEX-11NV4-1926-SM-5N9D4
60-69 years, male
84.4
GTEX-13OVL-2926-SM-5IFG3
50-59 years, male
81.6
GTEX-11ZTT-2226-SM-5CVLP
60-69 years, female
81.2
GTEX-WYVS-2026-SM-4RGNS
40-49 years, female
79.7
GTEX-11ZTS-3026-SM-5EQM7
60-69 years, female
79.4
GTEX-11TUW-2426-SM-5EQKB
60-69 years, male
74.6
GTEX-13VXT-1726-SM-5IFF5
20-29 years, female
70.0
GTEX-12WSM-1826-SM-5BC64
60-69 years, male
67.3
Show all
SALIVARY GLAND - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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