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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 1687.7
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 2142
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 2138.3
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 1812.7
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 1777.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 1629.9
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 1327.8
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 1509.4
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 116.5
Min RPKM: 20.5
Std RPKM: 16.0
Median RPKM: 49.8
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
116.5
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
106.3
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
91.0
GTEX-REY6-1226-SM-48FDR
60-69 years, male
89.1
GTEX-S32W-1926-SM-4AD63
50-59 years, female
87.2
GTEX-RN64-1826-SM-48FDV
50-59 years, male
85.5
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
77.4
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
75.0
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
74.0
GTEX-RU72-1426-SM-46MUF
50-59 years, female
72.7
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
71.0
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
69.3
GTEX-X261-1726-SM-4PQYT
50-59 years, male
68.8
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
66.9
GTEX-QEL4-1226-SM-447A4
50-59 years, male
64.5
GTEX-S33H-1626-SM-4AD68
30-39 years, male
64.2
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
63.2
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
63.1
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
63.1
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
62.7
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
62.4
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
62.0
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
61.5
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
61.1
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
60.8
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
60.5
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
60.5
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
60.3
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
59.9
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
59.8
GTEX-QESD-2026-SM-447BI
20-29 years, male
59.2
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
58.3
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
58.1
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
57.7
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
57.6
GTEX-YECK-1926-SM-4W21H
60-69 years, male
57.1
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
56.2
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
55.9
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
55.9
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
55.6
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
55.4
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
54.4
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
53.8
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
53.6
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
53.0
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
52.9
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
52.7
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
52.6
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
51.9
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
51.5
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
51.5
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
51.2
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
50.8
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
50.8
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
50.6
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
50.3
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
50.2
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
50.1
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
50.0
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
49.8
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
49.8
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
49.7
GTEX-12696-0826-SM-5EGGE
60-69 years, male
48.9
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
48.6
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
48.4
GTEX-1399T-0826-SM-5IFES
60-69 years, male
48.0
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
48.0
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
47.9
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
47.7
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
46.1
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
45.7
GTEX-11ZUS-2526-SM-59872
30-39 years, male
45.2
GTEX-P78B-1326-SM-3P611
40-49 years, female
45.2
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
44.9
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
44.9
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
44.4
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
44.2
GTEX-13112-1426-SM-5EGH8
50-59 years, male
43.8
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
43.8
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
42.8
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
42.7
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
42.2
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
41.6
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
41.5
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
41.3
GTEX-13113-1326-SM-5GCOI
60-69 years, female
41.2
GTEX-R53T-0326-SM-48FEC
50-59 years, female
41.0
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
40.5
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
40.4
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
40.1
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
39.6
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
39.4
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
39.3
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
38.5
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
38.4
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
38.0
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
37.8
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
36.6
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
36.2
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
36.1
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
35.8
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
34.5
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
34.3
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
34.3
GTEX-Q734-0326-SM-48U15
40-49 years, female
33.9
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
33.7
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
32.4
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
32.2
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
32.1
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
30.2
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
29.0
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
28.8
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
28.2
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
28.2
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
26.7
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
25.7
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
24.6
GTEX-11GSP-0626-SM-5986T
60-69 years, female
23.4
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
20.5
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
