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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 183
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 106.4
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 82.1
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 352.3
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 320.6
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 180.6
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 642.9
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 263.7
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 579.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 361.2
Min RPKM: 32.1
Std RPKM: 64.6
Median RPKM: 175.8
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
361.2
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
319.2
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
318.1
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
314.9
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
314.7
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
306.3
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
291.2
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
289.3
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
282.0
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
279.9
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
278.6
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
276.7
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
276.5
GTEX-13112-0226-SM-5P9IV
50-59 years, male
273.5
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
266.3
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
262.2
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
261.0
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
253.8
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
253.0
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
251.9
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
249.1
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
247.2
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
245.5
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
244.8
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
243.1
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
242.9
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
242.7
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
242.0
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
241.5
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
241.2
GTEX-11DXZ-2126-SM-59881
50-59 years, male
237.4
GTEX-11OF3-1826-SM-5987N
60-69 years, male
237.2
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
236.3
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
235.2
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
235.1
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
232.8
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
232.7
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
229.0
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
228.5
GTEX-117XS-2026-SM-5GID1
60-69 years, male
227.7
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
227.4
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
225.9
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
224.9
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
224.2
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
220.9
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
218.2
GTEX-REY6-0126-SM-48FDT
60-69 years, male
217.6
GTEX-Y111-2426-SM-4TT23
50-59 years, male
215.1
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
214.4
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
213.7
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
212.3
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
212.2
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
211.5
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
209.8
GTEX-S95S-1126-SM-4B64E
60-69 years, male
206.7
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
206.0
GTEX-13111-1526-SM-5EGJX
50-59 years, male
205.7
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
205.6
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
204.8
GTEX-12696-0226-SM-5EGL3
60-69 years, male
203.8
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
202.8
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
202.7
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
201.1
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
197.1
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
196.8
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
196.3
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
195.9
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
195.5
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
194.7
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
193.0
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
191.8
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
191.2
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
190.5
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
189.7
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
189.4
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
189.3
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
187.7
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
187.3
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
185.5
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
183.9
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
183.2
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
182.7
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
182.3
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
180.6
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
177.8
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
175.9
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
175.8
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
175.6
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
173.4
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
173.3
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
173.0
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
172.3
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
172.0
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
171.7
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
171.5
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
168.7
GTEX-V955-1926-SM-4KL1L
60-69 years, male
168.1
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
162.2
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
162.1
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
161.9
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
161.0
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
160.9
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
158.6
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
155.3
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
155.0
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
155.0
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
154.2
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
153.2
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
152.2
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
152.1
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
150.4
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
149.6
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
148.4
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
145.2
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
144.1
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
144.1
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
143.1
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
142.8
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
142.5
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
142.4
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
142.1
GTEX-R55D-0126-SM-48FEL
50-59 years, male
139.0
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
139.0
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
138.6
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
138.0
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
137.9
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
137.4
GTEX-R55C-1426-SM-48FED
40-49 years, male
133.8
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
133.6
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
133.5
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
133.0
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
132.1
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
129.2
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
129.0
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
125.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
124.8
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
122.3
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
122.2
GTEX-QLQW-1026-SM-447A9
30-39 years, male
116.9
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
116.2
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
116.1
GTEX-XPT6-1626-SM-4B655
20-29 years, male
115.0
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
114.3
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
113.9
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
113.0
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
109.0
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
105.2
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
104.6
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
101.9
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
98.1
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
95.4
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
92.9
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
92.6
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
90.9
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
88.4
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
88.0
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
87.1
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
84.2
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
81.7
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
79.3
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
78.1
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
77.7
GTEX-X261-2326-SM-4PQYU
50-59 years, male
73.6
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
65.6
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
65.3
GTEX-S33H-0126-SM-4AD62
30-39 years, male
61.9
GTEX-RN64-2326-SM-48FDW
50-59 years, male
58.7
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
55.9
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
51.0
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
50.0
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
41.6
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
32.1
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.