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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 171.5
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 150.3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 42.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 284.4
Min RPKM: 34.9
Std RPKM: 42.8
Median RPKM: 104.2
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
284.4
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
252.1
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
247.1
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
243.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
235.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
230.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
229.9
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
221.2
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
212.7
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
197.9
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
195.6
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
195.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
194.5
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
193.0
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
191.2
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
190.5
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
188.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
188.0
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
185.3
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
184.4
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
182.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
176.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
173.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
170.6
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
165.6
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
164.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
163.1
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
163.1
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
160.4
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
155.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
155.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
153.4
GTEX-R53T-1526-SM-48FEK
50-59 years, female
152.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
151.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
150.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
150.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
148.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
148.0
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
147.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
146.3
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
142.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
140.9
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
139.5
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
139.3
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
139.2
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
139.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
138.6
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
137.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
137.1
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
136.5
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
135.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
134.9
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
133.7
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
133.1
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
132.9
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
131.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
131.4
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
131.2
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
129.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
129.5
GTEX-144GM-0926-SM-5O994
20-29 years, male
128.9
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
128.0
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
127.6
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
127.5
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
127.0
GTEX-11P82-1326-SM-5HL62
20-29 years, male
126.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
126.7
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
125.8
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
124.4
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
124.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
124.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
123.9
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
123.6
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
123.1
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
123.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
122.5
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
121.8
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
121.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
119.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
119.5
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
119.3
GTEX-117YX-1426-SM-5H12H
50-59 years, male
117.8
GTEX-REY6-2426-SM-48FF5
60-69 years, male
117.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
116.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
115.9
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
115.0
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
114.9
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
113.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
113.2
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
112.2
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
110.6
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
110.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
110.4
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
110.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
110.2
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
110.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
109.2
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
108.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
108.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
107.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
106.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
106.4
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
105.3
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
104.9
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
104.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
104.2
GTEX-QVJO-1826-SM-447C9
60-69 years, female
104.2
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
104.2
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
104.2
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
103.8
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
103.8
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
103.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
103.3
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
103.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
102.4
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
102.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
101.5
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
101.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
100.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
100.3
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
100.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
99.2
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
98.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
98.1
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
98.1
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
97.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
97.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
97.6
GTEX-1122O-1226-SM-5H113
60-69 years, female
97.2
GTEX-11EI6-0626-SM-5985T
60-69 years, male
96.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
96.6
GTEX-QEL4-2126-SM-447AE
50-59 years, male
96.4
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
95.5
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
95.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
95.2
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
94.0
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
93.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
93.5
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
93.1
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
92.4
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
92.0
GTEX-TML8-1226-SM-32QON
40-49 years, female
91.4
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
91.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
90.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
90.5
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
90.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
90.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
89.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
89.4
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
88.9
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
88.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
88.1
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
88.1
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
87.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
86.9
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
86.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
86.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
86.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
85.7
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
85.7
GTEX-1192X-2326-SM-5987X
50-59 years, male
85.6
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
85.0
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
84.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
84.3
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
83.5
GTEX-S341-1526-SM-4AD6K
40-49 years, female
83.3
GTEX-117XS-1926-SM-5GICO
60-69 years, male
83.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
82.7
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
81.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
81.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
79.4
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
78.6
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
77.5
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
77.4
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
77.4
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
77.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
77.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
76.7
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
76.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
75.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
75.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
75.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
74.8
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
74.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
73.5
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
73.3
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
73.0
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
72.9
GTEX-X261-0626-SM-3NMD9
50-59 years, male
72.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
71.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
70.5
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
70.2
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
69.9
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
69.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
69.8
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
69.5
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
69.3
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
68.6
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
66.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
66.0
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
66.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
65.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
64.1
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
63.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
63.5
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
63.4
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
62.2
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
61.4
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
58.2
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
54.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
51.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
50.1
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
42.7
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
34.9
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.