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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 39
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 111.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 27.1
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 242.9
Min RPKM: 3.0
Std RPKM: 41.0
Median RPKM: 30.5
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
242.9
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
195.2
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
180.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
161.3
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
149.9
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
141.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
135.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
126.2
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
124.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
120.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
119.3
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
115.2
GTEX-T6MN-0726-SM-32PML
50-59 years, male
114.7
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
111.2
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
111.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
110.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
106.3
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
105.4
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
102.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
99.4
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
98.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
97.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
97.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
96.2
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
95.3
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
94.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
94.9
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
90.3
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
89.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
87.5
GTEX-QEL4-2126-SM-447AE
50-59 years, male
84.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
84.6
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
83.8
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
83.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
82.9
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
82.1
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
82.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
81.7
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
81.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
79.1
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
79.0
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
78.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
77.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
76.6
GTEX-RU72-0626-SM-46MUI
50-59 years, female
75.3
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
75.0
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
73.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
70.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
70.5
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
70.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
69.3
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
69.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
67.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
66.8
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
66.4
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
65.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
65.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
64.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
63.7
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
62.7
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
59.5
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
59.5
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
59.1
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
58.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
57.6
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
56.1
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
55.5
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
54.4
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
54.0
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
53.9
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
53.1
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
53.0
GTEX-XBED-1626-SM-47JYN
60-69 years, male
52.8
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
52.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
52.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
52.3
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
52.1
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
51.2
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
50.8
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
50.2
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
48.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
48.3
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
47.9
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
47.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
46.5
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
46.5
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
46.4
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
45.9
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
45.8
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
45.0
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
43.7
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
43.6
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
42.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
41.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
40.0
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
38.8
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
37.3
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
37.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
36.8
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
36.5
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
34.3
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
32.2
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
32.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
31.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
31.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
30.8
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
30.6
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
30.4
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
28.9
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
28.8
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
26.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
25.2
GTEX-QVJO-1826-SM-447C9
60-69 years, female
25.2
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
24.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
24.4
GTEX-13113-1726-SM-5GCOO
60-69 years, female
24.1
GTEX-R53T-1526-SM-48FEK
50-59 years, female
23.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
23.0
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
22.5
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
22.0
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
21.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
20.7
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
20.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
20.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
20.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
20.0
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
18.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
18.2
GTEX-X261-0626-SM-3NMD9
50-59 years, male
17.9
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
17.8
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
17.7
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
17.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
15.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
15.7
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
15.4
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
15.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
15.0
GTEX-11OF3-1926-SM-59889
60-69 years, male
14.8
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
14.6
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
14.5
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
14.4
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
14.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
13.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
13.8
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
13.5
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
12.9
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
12.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
12.6
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
12.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
12.2
GTEX-117XS-1926-SM-5GICO
60-69 years, male
11.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
11.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
10.9
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
10.8
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
10.5
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
10.4
GTEX-R55D-0826-SM-48FEA
50-59 years, male
10.4
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
10.0
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
9.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
9.6
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
9.3
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
9.2
GTEX-11P82-1326-SM-5HL62
20-29 years, male
9.2
GTEX-14753-2426-SM-5LU8U
60-69 years, male
8.9
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
8.8
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
8.8
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
8.7
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
8.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
8.2
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
8.2
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
8.1
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
8.0
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
8.0
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
7.9
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
7.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
7.8
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
7.6
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
7.5
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
7.4
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
7.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
7.3
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
7.2
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
7.1
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
7.0
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
6.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
6.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
6.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
6.3
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
6.3
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
6.2
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
6.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
5.9
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
5.8
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
5.8
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
5.7
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
5.7
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
5.2
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
5.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
5.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
4.7
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
4.7
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
4.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
4.6
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
4.5
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
4.2
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
4.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
4.2
GTEX-144GM-0926-SM-5O994
20-29 years, male
4.1
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
4.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
3.5
GTEX-REY6-2426-SM-48FF5
60-69 years, male
3.3
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
3.2
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
3.1
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
3.0
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.