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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 17.8
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 2.5
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 2.1
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 6.1
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 5.8
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 9.5
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 5.8
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 9.9
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 66.8
Min RPKM: 9.5
Std RPKM: 10.7
Median RPKM: 29.2
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
66.8
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
62.4
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
55.0
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
54.8
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
48.6
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
48.2
GTEX-RN64-1826-SM-48FDV
50-59 years, male
48.2
GTEX-RU72-1426-SM-46MUF
50-59 years, female
47.8
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
46.7
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
45.5
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
45.5
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
44.7
GTEX-QESD-2026-SM-447BI
20-29 years, male
44.6
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
44.0
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
43.0
GTEX-R53T-0326-SM-48FEC
50-59 years, female
42.8
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
42.6
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
42.3
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
41.4
GTEX-13112-1426-SM-5EGH8
50-59 years, male
41.0
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
40.2
GTEX-Q734-0326-SM-48U15
40-49 years, female
40.0
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
40.0
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
39.8
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
39.4
GTEX-13113-1326-SM-5GCOI
60-69 years, female
37.9
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
37.3
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
36.9
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
36.9
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
36.8
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
36.5
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
36.3
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
35.8
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
35.3
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
35.3
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
35.1
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
35.0
GTEX-YECK-1926-SM-4W21H
60-69 years, male
34.4
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
34.1
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
33.9
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
33.8
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
33.3
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
33.2
GTEX-REY6-1226-SM-48FDR
60-69 years, male
32.9
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
32.8
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
32.7
GTEX-S33H-1626-SM-4AD68
30-39 years, male
32.0
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
31.8
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
31.3
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
31.2
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
31.1
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
31.0
GTEX-QEL4-1226-SM-447A4
50-59 years, male
31.0
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
30.7
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
30.5
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
29.9
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
29.8
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
29.6
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
29.3
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
29.2
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
29.1
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
29.0
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
28.8
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
28.8
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
28.8
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
28.5
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
27.6
GTEX-11GSP-0626-SM-5986T
60-69 years, female
27.4
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
27.2
GTEX-11ZUS-2526-SM-59872
30-39 years, male
27.0
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
26.8
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
26.1
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
25.6
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
25.1
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
25.1
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
25.1
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
25.0
GTEX-S32W-1926-SM-4AD63
50-59 years, female
24.9
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
24.7
GTEX-P78B-1326-SM-3P611
40-49 years, female
24.6
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
24.5
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
24.3
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
24.2
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
24.1
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
23.7
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
23.4
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
23.3
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
23.3
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
23.3
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
23.3
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
23.0
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
22.9
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
22.8
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
22.6
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
22.6
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
22.6
GTEX-1399T-0826-SM-5IFES
60-69 years, male
22.5
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
21.0
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
20.9
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
20.8
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
20.5
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
19.9
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
18.7
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
18.2
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
18.0
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
17.4
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
17.3
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
17.0
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
16.1
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
15.7
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
15.1
GTEX-X261-1726-SM-4PQYT
50-59 years, male
15.1
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
15.0
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
14.7
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
13.4
GTEX-12696-0826-SM-5EGGE
60-69 years, male
12.7
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
12.1
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
10.8
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
9.5
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
