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PNPLA2
COLON - Expression summary
RNA expressioni
HPA:17.6TPM
GTEx:48.2RPKM
FANTOM5:83.0Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 17.6
overview Male, age 54 Sample 1
TPM: 41.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 18
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 18.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 47.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 13.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 6.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 10.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 10.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 26.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 14.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 48.2
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 39.9
Samples: 149

Max RPKM: 87.2
Min RPKM: 15.2
Std RPKM: 11.6
Median RPKM: 38.5
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 87.2
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 68.5
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 67.4
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 66.6
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 63.6
GTEX-139T6-1426-SM-5P9J7 50-59 years, male 63.0
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 62.9
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 62.8
GTEX-13OVI-2126-SM-5KM3U 60-69 years, female 61.0
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 58.7
Show all
Colon - Transverse
RPKM: 54.4
Samples: 196

Max RPKM: 510.5
Min RPKM: 19.2
Std RPKM: 38.7
Median RPKM: 48.4
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 510.5
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 199.3
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 154.0
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 109.8
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 102.0
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 101.6
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 95.7
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 95.2
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 91.1
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 84.2
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 83.0
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 63.7
FF:10014-101C5 62,83,84 years, mixed 83.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.