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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 639.8
Min RPKM: 39.5
Std RPKM: 104.7
Median RPKM: 140.9
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
639.8
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
523.6
GTEX-P78B-1926-SM-3P616
40-49 years, female
467.6
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
415.6
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
383.7
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
375.7
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
359.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
338.2
GTEX-S32W-1226-SM-4AD67
50-59 years, female
314.8
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
298.3
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
294.7
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
265.9
GTEX-S341-0726-SM-4AD5R
40-49 years, female
246.2
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
229.5
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
228.9
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
222.5
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
218.7
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
218.5
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
214.2
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
213.3
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
212.0
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
210.4
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
205.2
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
201.2
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
200.8
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
200.0
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
193.9
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
189.6
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
189.1
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
188.5
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
187.3
GTEX-QCQG-1426-SM-48U22
50-59 years, female
185.9
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
182.7
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
179.8
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
179.1
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
178.4
GTEX-RU72-2226-SM-46MUE
50-59 years, female
176.0
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
175.2
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
168.2
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
164.6
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
161.3
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
160.1
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
155.5
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
154.9
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
150.9
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
150.5
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
150.1
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
144.3
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
140.9
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
140.3
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
137.1
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
134.4
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
133.2
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
132.4
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
125.9
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
125.1
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
123.9
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
123.8
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
117.2
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
116.7
GTEX-Q734-0726-SM-48TZP
40-49 years, female
115.2
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
112.2
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
110.6
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
110.5
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
109.9
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
109.5
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
108.4
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
106.4
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
101.9
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
100.2
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
98.9
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
97.1
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
97.0
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
96.6
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
95.3
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
94.9
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
94.1
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
94.1
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
85.0
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
84.7
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
83.1
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
80.1
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
77.1
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
75.7
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
75.4
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
69.0
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
66.1
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
62.6
GTEX-11I78-1926-SM-59878
50-59 years, female
59.6
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
59.5
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
59.3
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
54.9
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
47.9
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
47.8
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
43.2
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
41.4
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
39.5
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.