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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 328.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 357.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 502.5
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 227.8
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 320.5
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 295
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 111.2
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 265
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 121.3
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 376.7
Min RPKM: 145.7
Std RPKM: 37.1
Median RPKM: 230.4
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
376.7
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
324.0
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
321.7
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
317.2
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
317.2
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
311.8
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
303.4
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
302.8
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
299.7
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
297.3
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
296.5
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
296.2
GTEX-V955-1926-SM-4KL1L
60-69 years, male
289.7
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
287.8
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
287.2
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
286.9
GTEX-XPT6-1626-SM-4B655
20-29 years, male
286.1
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
282.0
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
280.7
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
279.8
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
279.6
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
278.3
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
278.2
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
274.0
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
273.9
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
273.4
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
272.4
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
272.0
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
267.7
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
266.3
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
266.2
GTEX-S95S-1126-SM-4B64E
60-69 years, male
262.4
GTEX-11DXZ-2126-SM-59881
50-59 years, male
260.7
GTEX-QLQW-1026-SM-447A9
30-39 years, male
259.5
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
257.6
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
257.3
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
257.0
GTEX-R55C-1426-SM-48FED
40-49 years, male
257.0
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
256.9
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
256.2
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
255.9
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
254.2
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
254.2
GTEX-117XS-2026-SM-5GID1
60-69 years, male
253.2
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
252.7
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
252.6
GTEX-13111-1526-SM-5EGJX
50-59 years, male
252.3
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
252.2
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
252.1
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
251.3
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
251.1
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
250.8
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
250.0
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
249.5
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
249.4
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
248.4
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
248.3
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
246.2
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
244.4
GTEX-13112-0226-SM-5P9IV
50-59 years, male
244.0
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
243.6
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
243.3
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
243.1
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
242.8
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
242.5
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
242.1
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
242.1
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
241.6
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
241.1
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
240.4
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
239.8
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
239.8
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
239.5
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
238.3
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
237.8
GTEX-REY6-0126-SM-48FDT
60-69 years, male
237.0
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
236.8
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
236.5
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
236.0
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
235.8
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
235.7
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
234.8
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
232.8
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
232.8
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
231.6
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
231.0
GTEX-X261-2326-SM-4PQYU
50-59 years, male
229.8
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
229.6
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
229.1
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
227.6
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
227.2
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
227.0
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
226.9
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
226.9
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
226.9
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
225.5
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
225.2
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
224.8
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
224.8
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
224.4
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
224.0
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
223.9
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
223.8
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
223.0
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
222.2
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
221.6
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
221.0
GTEX-RN64-2326-SM-48FDW
50-59 years, male
219.7
GTEX-S33H-0126-SM-4AD62
30-39 years, male
218.2
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
218.2
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
216.6
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
216.1
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
216.0
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
213.3
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
213.0
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
212.7
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
212.4
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
211.4
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
211.3
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
211.2
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
211.1
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
211.0
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
210.9
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
210.7
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
210.6
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
210.4
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
210.3
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
210.2
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
209.8
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
209.6
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
208.8
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
208.1
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
208.0
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
207.8
GTEX-12696-0226-SM-5EGL3
60-69 years, male
206.7
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
206.1
GTEX-11OF3-1826-SM-5987N
60-69 years, male
205.0
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
204.0
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
203.2
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
203.1
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
203.1
GTEX-R55D-0126-SM-48FEL
50-59 years, male
202.7
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
202.3
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
201.9
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
201.8
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
200.3
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
199.4
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
196.7
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
196.5
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
196.4
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
196.1
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
194.2
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
193.6
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
192.2
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
190.3
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
189.2
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
189.1
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
186.6
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
184.3
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
183.7
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
182.1
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
179.6
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
179.5
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
178.1
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
175.9
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
173.8
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
165.1
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
164.7
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
161.1
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
157.8
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
145.9
GTEX-Y111-2426-SM-4TT23
50-59 years, male
145.7
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.