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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1242.5
Min RPKM: 391.1
Std RPKM: 167.1
Median RPKM: 699.1
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
1242.5
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
1124.3
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
1116.7
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
1063.1
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
965.1
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
961.4
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
958.6
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
947.7
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
943.6
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
940.2
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
937.3
GTEX-QCQG-0226-SM-48U28
50-59 years, female
915.1
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
913.7
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
906.6
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
903.1
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
902.0
GTEX-R55G-0226-SM-48FEI
40-49 years, female
887.2
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
883.0
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
872.5
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
867.2
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
864.9
GTEX-144GN-2126-SM-5O99D
50-59 years, male
863.6
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
855.2
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
853.5
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
841.2
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
834.5
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
834.2
GTEX-QV31-0126-SM-447BP
30-39 years, male
823.9
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
822.6
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
812.5
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
800.4
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
799.7
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
782.5
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
775.0
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
771.3
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
771.3
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
760.1
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
758.0
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
757.6
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
741.7
GTEX-QLQW-0126-SM-447BK
30-39 years, male
740.2
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
739.6
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
730.3
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
728.1
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
719.7
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
711.5
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
710.2
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
708.7
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
707.4
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
707.1
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
699.3
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
699.1
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
699.1
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
685.1
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
684.1
GTEX-13111-0126-SM-5EGHO
50-59 years, male
683.8
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
681.1
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
653.7
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
652.1
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
648.3
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
639.1
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
638.0
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
637.3
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
629.8
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
627.1
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
623.3
GTEX-PX3G-0926-SM-48U12
20-29 years, female
621.2
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
618.8
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
616.5
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
611.6
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
607.8
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
606.9
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
606.6
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
604.6
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
602.5
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
598.3
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
597.2
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
596.1
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
594.9
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
593.8
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
590.9
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
585.7
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
580.9
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
580.7
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
573.3
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
568.7
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
563.8
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
545.7
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
544.0
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
541.8
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
527.5
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
520.3
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
502.3
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
500.8
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
494.5
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
486.6
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
482.4
GTEX-X585-1826-SM-4QAS3
50-59 years, male
471.6
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
467.3
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
453.6
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
448.9
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
429.0
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
421.2
GTEX-Q734-0226-SM-48U1A
40-49 years, female
391.1
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.