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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 38
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 5.5
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 16.9
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 247.1
Min RPKM: 0.4
Std RPKM: 36.7
Median RPKM: 19.3
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
247.1
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
209.8
GTEX-XBED-1626-SM-47JYN
60-69 years, male
179.6
GTEX-117YX-1426-SM-5H12H
50-59 years, male
168.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
146.7
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
132.9
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
128.7
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
117.7
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
114.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
109.2
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
106.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
103.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
101.9
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
92.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
81.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
79.5
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
77.6
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
76.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
76.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
73.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
73.2
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
68.7
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
67.7
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
67.5
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
67.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
66.6
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
61.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
61.1
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
61.0
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
60.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
59.0
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
57.0
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
55.8
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
55.0
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
54.7
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
54.3
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
50.9
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
50.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
49.0
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
48.9
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
48.0
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
47.5
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
45.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
45.0
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
44.1
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
43.6
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
41.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
41.3
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
40.5
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
40.2
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
39.9
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
39.7
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
39.1
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
39.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
38.3
GTEX-QEL4-2126-SM-447AE
50-59 years, male
37.8
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
37.6
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
37.5
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
37.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
36.6
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
36.4
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
35.1
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
34.9
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
34.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
34.4
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
34.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
32.5
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
31.8
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
31.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
31.5
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
31.3
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
31.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
31.0
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
29.4
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
29.0
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
28.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
28.6
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
28.6
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
28.2
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
27.9
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
27.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
27.1
GTEX-R55D-0826-SM-48FEA
50-59 years, male
26.4
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
25.9
GTEX-S341-1526-SM-4AD6K
40-49 years, female
25.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
25.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
24.5
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
24.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
23.6
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
23.3
GTEX-14753-2426-SM-5LU8U
60-69 years, male
22.9
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
22.9
GTEX-13113-1726-SM-5GCOO
60-69 years, female
22.7
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
22.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
22.3
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
22.3
GTEX-REY6-2426-SM-48FF5
60-69 years, male
22.1
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
21.8
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
21.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
21.0
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
21.0
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
20.7
GTEX-X261-0626-SM-3NMD9
50-59 years, male
20.6
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
19.9
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
19.6
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
19.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
19.4
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
19.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
19.2
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
17.7
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
17.6
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
17.2
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
16.3
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
16.2
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
15.8
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
15.5
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
15.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
15.1
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
15.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
14.8
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
14.7
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
14.7
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
14.2
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
14.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
13.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
13.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
12.8
GTEX-117XS-1926-SM-5GICO
60-69 years, male
12.2
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
12.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
12.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
11.8
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
10.5
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
10.3
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
10.2
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
10.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
9.5
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
9.4
GTEX-1192X-2326-SM-5987X
50-59 years, male
9.3
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
9.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
9.3
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
9.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
9.1
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
8.9
GTEX-11P82-1326-SM-5HL62
20-29 years, male
8.7
GTEX-TML8-1226-SM-32QON
40-49 years, female
8.7
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
8.7
GTEX-144GM-0926-SM-5O994
20-29 years, male
8.6
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
8.5
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
8.3
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
8.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
8.3
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
8.2
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
8.1
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
8.1
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
7.8
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
7.8
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
7.8
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
7.7
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
7.7
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
7.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
7.4
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
7.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
6.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
6.6
GTEX-R53T-1526-SM-48FEK
50-59 years, female
6.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
6.6
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
6.5
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
6.1
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
6.0
GTEX-11EI6-0626-SM-5985T
60-69 years, male
5.7
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
5.5
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
5.4
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
5.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
5.2
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
5.1
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
4.9
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
4.9
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
4.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
4.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
4.6
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
4.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
4.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
4.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
4.3
GTEX-QVJO-1826-SM-447C9
60-69 years, female
4.2
GTEX-11OF3-1926-SM-59889
60-69 years, male
4.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
4.1
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
4.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
3.8
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
3.5
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
3.4
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
3.3
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
3.2
GTEX-T6MN-0726-SM-32PML
50-59 years, male
3.1
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
2.7
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
2.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
2.5
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
2.2
GTEX-RU72-0626-SM-46MUI
50-59 years, female
2.2
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
1.9
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
1.8
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
1.7
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
1.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
1.6
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
1.5
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
1.5
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
1.2
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
1.1
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
1.1
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
0.9
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
0.9
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
0.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
0.5
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
0.4
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.