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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 203.3
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 48.9
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 66.3
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 441.7
Min RPKM: 60.2
Std RPKM: 73.7
Median RPKM: 219.6
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
441.7
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
428.1
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
411.2
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
408.4
GTEX-11OF3-1926-SM-59889
60-69 years, male
392.0
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
383.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
379.2
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
378.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
362.8
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
351.2
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
350.9
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
349.5
GTEX-R53T-1526-SM-48FEK
50-59 years, female
348.2
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
347.0
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
344.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
338.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
338.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
335.6
GTEX-R55D-0826-SM-48FEA
50-59 years, male
330.3
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
328.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
327.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
327.4
GTEX-REY6-2426-SM-48FF5
60-69 years, male
326.6
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
326.0
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
320.4
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
318.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
318.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
317.9
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
316.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
315.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
314.9
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
314.4
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
313.8
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
312.7
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
312.5
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
310.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
307.6
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
305.0
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
299.4
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
298.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
297.4
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
291.7
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
290.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
289.4
GTEX-117XS-1926-SM-5GICO
60-69 years, male
287.9
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
284.8
GTEX-QVJO-1826-SM-447C9
60-69 years, female
283.9
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
283.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
281.7
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
280.9
GTEX-11EI6-0626-SM-5985T
60-69 years, male
279.6
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
279.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
276.1
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
272.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
270.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
268.8
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
268.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
267.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
267.3
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
267.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
266.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
265.7
GTEX-WFON-1826-SM-3GILG
40-49 years, male
265.0
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
264.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
263.6
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
263.2
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
261.2
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
260.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
260.3
GTEX-1122O-1226-SM-5H113
60-69 years, female
259.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
258.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
255.7
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
253.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
252.7
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
252.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
251.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
249.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
248.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
246.9
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
245.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
245.3
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
244.7
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
242.6
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
242.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
241.8
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
241.8
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
241.2
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
240.1
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
240.0
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
239.8
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
238.3
GTEX-11P81-1926-SM-5BC53
30-39 years, female
238.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
237.4
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
236.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
236.3
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
234.4
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
234.1
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
233.3
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
232.5
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
231.3
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
231.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
231.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
229.7
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
228.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
223.1
GTEX-11P82-1326-SM-5HL62
20-29 years, male
221.2
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
219.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
219.3
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
218.0
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
216.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
215.9
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
215.8
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
215.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
213.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
211.9
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
211.2
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
211.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
209.6
GTEX-S341-1526-SM-4AD6K
40-49 years, female
209.6
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
208.5
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
207.6
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
207.5
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
207.5
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
206.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
206.3
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
206.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
205.3
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
202.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
200.9
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
200.6
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
198.9
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
198.7
GTEX-117YX-1426-SM-5H12H
50-59 years, male
197.7
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
196.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
193.4
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
193.1
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
192.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
190.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
190.2
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
189.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
188.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
188.1
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
187.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
186.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
185.9
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
185.8
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
184.9
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
183.7
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
183.7
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
183.7
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
183.6
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
183.3
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
179.0
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
175.0
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
173.3
GTEX-XBED-1626-SM-47JYN
60-69 years, male
173.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
171.4
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
171.2
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
170.9
GTEX-1192X-2326-SM-5987X
50-59 years, male
170.3
GTEX-RU72-0626-SM-46MUI
50-59 years, female
170.2
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
169.0
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
168.9
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
166.4
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
166.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
165.7
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
165.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
164.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
163.6
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
163.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
161.0
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
160.7
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
158.0
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
157.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
155.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
153.7
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
153.7
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
152.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
150.5
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
150.1
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
149.9
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
149.0
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
148.6
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
147.1
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
145.6
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
144.7
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
144.3
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
144.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
143.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
141.0
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
140.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
137.4
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
137.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
136.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
136.0
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
135.7
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
134.5
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
133.9
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
132.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
131.9
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
131.5
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
129.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
125.8
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
125.0
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
122.8
GTEX-QEL4-2126-SM-447AE
50-59 years, male
116.1
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
111.8
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
99.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
99.1
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
95.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
87.5
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
87.1
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
85.1
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
60.2
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.