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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 410.8
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 251.3
Min RPKM: 36.3
Std RPKM: 51.5
Median RPKM: 159.0
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
251.3
GTEX-WL46-2926-SM-3LK82
50-59 years, male
234.8
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
232.3
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
232.1
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
231.3
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
222.6
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
219.8
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
219.5
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
218.2
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
216.9
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
216.5
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
213.5
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
213.0
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
213.0
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
211.9
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
211.4
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
210.2
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
208.4
GTEX-X585-3026-SM-46MWF
50-59 years, male
207.5
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
206.1
GTEX-11PRG-2926-SM-5987A
50-59 years, male
205.7
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
201.8
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
201.0
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
199.0
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
196.3
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
194.8
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
194.5
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
193.9
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
193.7
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
193.5
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
191.8
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
191.7
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
191.3
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
189.7
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
186.7
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
186.7
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
185.2
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
183.9
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
182.3
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
180.8
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
179.6
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
178.4
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
178.1
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
175.9
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
175.4
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
172.1
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
172.0
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
170.8
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
169.2
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
168.9
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
168.7
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
168.0
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
164.0
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
162.5
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
161.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
161.5
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
159.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
159.0
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
157.9
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
157.7
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
154.8
GTEX-145MF-2726-SM-5O995
50-59 years, male
152.8
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
152.4
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
152.1
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
151.0
GTEX-1128S-2726-SM-5H12C
60-69 years, female
150.2
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
147.9
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
147.6
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
145.4
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
141.2
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
139.5
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
138.5
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
136.8
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
134.3
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
133.8
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
132.4
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
130.7
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
128.8
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
128.0
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
126.5
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
125.7
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
123.8
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
123.4
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
119.9
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
113.2
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
113.0
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
112.1
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
111.8
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
108.3
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
107.1
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
103.3
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
90.7
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
89.8
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
89.2
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
88.9
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
88.6
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
88.1
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
87.2
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
86.9
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
86.8
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
86.3
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
83.5
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
78.4
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
77.2
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
76.3
GTEX-144FL-3026-SM-5O99C
50-59 years, male
69.8
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
63.6
GTEX-11GSP-3226-SM-5986O
60-69 years, female
62.5
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
60.4
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
54.4
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
51.0
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
49.4
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
37.0
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
36.3
Show all
Brain - Frontal Cortex (BA9) RPKM: 199.2
Samples: 108
Max RPKM: 344.6
Min RPKM: 27.8
Std RPKM: 82.2
Median RPKM: 213.8
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
344.6
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
343.2
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
328.9
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
327.0
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
326.0
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
320.1
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
311.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
311.4
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
311.2
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
311.0
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
298.1
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
295.3
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
295.3
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
294.5
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
294.4
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
290.0
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
283.0
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
274.7
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
273.2
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
272.2
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
271.0
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
267.6
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
267.6
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
264.8
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
263.8
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
263.1
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
258.3
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
256.4
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
254.2
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
253.4
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
253.0
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
251.9
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
251.4
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
251.1
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
251.0
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
250.8
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
248.5
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
245.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
243.9
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
243.8
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
243.2
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
242.4
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
242.1
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
240.7
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
238.7
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
237.8
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
237.1
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
236.1
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
233.8
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
230.8
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
224.6
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
219.2
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
214.6
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
214.3
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
213.3
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
211.4
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
208.2
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
207.6
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
197.5
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
197.5
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
197.2
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
192.7
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
186.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
185.3
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
184.5
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
177.3
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
176.9
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
175.0
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
173.9
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
171.6
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
169.3
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
167.8
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
164.5
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
161.0
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
161.0
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
158.1
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
156.9
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
156.7
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
156.0
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
154.7
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
137.1
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
136.1
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
135.0
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
120.0
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
119.1
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
118.9
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
116.1
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
112.0
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
108.0
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
103.1
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
99.3
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
92.9
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
91.7
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
89.0
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
87.5
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
82.7
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
72.7
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
68.8
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
68.4
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
66.3
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
65.4
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
53.2
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
51.1
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
50.8
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
44.7
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
29.5
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
29.2
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
27.8
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.