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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 44.1
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 6.8
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 9.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 34.8
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 23.6
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 47.8
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 31.8
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 72.5
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 157.1
Min RPKM: 9.5
Std RPKM: 29.4
Median RPKM: 60.9
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
157.1
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
145.3
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
132.2
GTEX-S33H-1626-SM-4AD68
30-39 years, male
128.4
GTEX-RN64-1826-SM-48FDV
50-59 years, male
114.1
GTEX-R53T-0326-SM-48FEC
50-59 years, female
113.0
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
108.5
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
108.3
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
106.4
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
102.7
GTEX-Q734-0326-SM-48U15
40-49 years, female
102.6
GTEX-X261-1726-SM-4PQYT
50-59 years, male
99.7
GTEX-YECK-1926-SM-4W21H
60-69 years, male
98.5
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
96.6
GTEX-1399T-0826-SM-5IFES
60-69 years, male
96.4
GTEX-RU72-1426-SM-46MUF
50-59 years, female
96.0
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
92.6
GTEX-QESD-2026-SM-447BI
20-29 years, male
92.4
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
92.3
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
92.0
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
90.6
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
89.8
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
88.7
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
88.0
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
87.4
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
86.9
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
85.9
GTEX-P78B-1326-SM-3P611
40-49 years, female
84.9
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
84.2
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
83.1
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
83.0
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
82.6
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
81.7
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
80.1
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
77.4
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
77.4
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
76.1
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
76.0
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
76.0
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
75.9
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
75.0
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
74.9
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
74.0
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
72.9
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
72.5
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
72.3
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
70.6
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
69.9
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
67.6
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
66.8
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
66.1
GTEX-REY6-1226-SM-48FDR
60-69 years, male
65.9
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
65.1
GTEX-11ZUS-2526-SM-59872
30-39 years, male
64.7
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
62.9
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
62.5
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
61.8
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
61.4
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
61.1
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
60.9
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
60.6
GTEX-13112-1426-SM-5EGH8
50-59 years, male
60.4
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
59.6
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
59.5
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
57.2
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
57.1
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
56.4
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
54.8
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
54.8
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
54.7
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
52.0
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
50.0
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
50.0
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
49.5
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
45.8
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
45.6
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
44.8
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
43.3
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
43.3
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
43.0
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
42.6
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
41.5
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
41.2
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
40.8
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
39.9
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
39.9
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
39.4
GTEX-QEL4-1226-SM-447A4
50-59 years, male
38.7
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
38.1
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
37.7
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
36.9
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
36.6
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
36.5
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
34.7
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
34.6
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
33.9
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
33.4
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
32.9
GTEX-11GSP-0626-SM-5986T
60-69 years, female
32.0
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
31.3
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
31.3
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
30.9
GTEX-13113-1326-SM-5GCOI
60-69 years, female
29.5
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
29.3
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
29.2
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
29.1
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
28.3
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
28.1
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
27.9
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
26.9
GTEX-S32W-1926-SM-4AD63
50-59 years, female
26.6
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
22.1
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
20.8
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
20.0
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
19.3
GTEX-12696-0826-SM-5EGGE
60-69 years, male
18.9
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
18.2
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
14.3
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
9.5
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
