Fields »
ABOUTMENU
HELP
NEWS
ACSF3
COLON - Expression summary
RNA expressioni
HPA:16.8TPM
GTEx:3.8RPKM
FANTOM5:20.4Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 16.8
overview Male, age 54 Sample 1
TPM: 19.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 26.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 29.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 21
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 15.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 9.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 14
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 14.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 17.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 14.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 15.8
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 11.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 3.8
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 2.8
Samples: 149

Max RPKM: 4.7
Min RPKM: 1.3
Std RPKM: 0.5
Median RPKM: 2.8
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 4.7
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 4.4
GTEX-V955-1726-SM-4JBHF 60-69 years, male 4.0
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 4.0
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 3.8
GTEX-XQ8I-2326-SM-4BOQC 50-59 years, male 3.8
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 3.8
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 3.7
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 3.7
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 3.7
Show all
Colon - Transverse
RPKM: 4.5
Samples: 196

Max RPKM: 8.3
Min RPKM: 0.5
Std RPKM: 1.5
Median RPKM: 4.7
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 8.3
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 7.9
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 7.8
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 7.8
GTEX-R55D-1826-SM-48FEF 50-59 years, male 7.6
GTEX-Q2AH-1226-SM-48TZL 40-49 years, male 7.4
GTEX-QCQG-1626-SM-48U26 50-59 years, female 7.3
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 7.3
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 7.2
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 7.0
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 20.4
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 18.2
FF:10014-101C5 62,83,84 years, mixed 20.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.