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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 285.3
Min RPKM: 31.8
Std RPKM: 54.1
Median RPKM: 134.2
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
285.3
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
258.3
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
245.7
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
227.7
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
221.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
220.8
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
217.1
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
215.0
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
213.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
211.3
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
210.4
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
210.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
209.8
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
206.6
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
200.0
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
196.7
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
193.7
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
193.2
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
191.1
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
189.8
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
187.8
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
187.0
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
186.9
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
184.9
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
181.5
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
175.9
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
173.9
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
170.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
169.8
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
166.5
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
166.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
166.0
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
163.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
160.7
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
157.9
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
157.4
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
157.2
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
154.6
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
153.0
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
152.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
149.2
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
144.3
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
142.9
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
142.6
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
139.0
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
136.9
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
135.1
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
133.3
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
133.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
130.5
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
124.4
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
124.0
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
123.4
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
123.3
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
118.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
117.1
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
116.0
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
114.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
114.1
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
112.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
112.5
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
112.1
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
111.4
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
109.7
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
108.3
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
106.9
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
104.8
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
103.7
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
101.5
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
101.3
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
99.8
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
99.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
95.9
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
93.3
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
92.2
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
91.8
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
91.4
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
89.3
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
80.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
78.1
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
78.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
74.6
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
73.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
73.8
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
73.2
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
70.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
59.5
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
55.1
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
54.9
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
53.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
53.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
49.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
48.0
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
31.8
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.