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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 231.7
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 269.9
Min RPKM: 83.6
Std RPKM: 36.7
Median RPKM: 189.1
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
269.9
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
266.3
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
259.9
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
258.7
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
245.2
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
237.1
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
236.9
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
236.3
GTEX-X585-3026-SM-46MWF
50-59 years, male
236.0
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
236.0
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
232.7
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
231.5
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
230.4
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
228.1
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
226.8
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
225.1
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
225.0
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
224.0
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
223.0
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
221.9
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
221.1
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
220.0
GTEX-11PRG-2926-SM-5987A
50-59 years, male
219.9
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
218.2
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
217.8
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
217.3
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
216.0
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
214.9
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
214.5
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
214.3
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
214.0
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
213.6
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
213.1
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
212.8
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
212.0
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
212.0
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
211.9
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
206.5
GTEX-WL46-2926-SM-3LK82
50-59 years, male
206.3
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
204.3
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
202.7
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
199.9
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
199.1
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
198.1
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
198.1
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
198.0
GTEX-145MF-2726-SM-5O995
50-59 years, male
197.6
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
195.9
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
194.5
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
193.8
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
193.7
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
193.5
GTEX-144FL-3026-SM-5O99C
50-59 years, male
192.3
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
192.3
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
190.0
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
189.9
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
189.2
GTEX-11GSP-3226-SM-5986O
60-69 years, female
189.1
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
188.1
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
186.6
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
185.4
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
184.2
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
183.7
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
183.7
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
183.5
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
183.4
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
182.5
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
182.2
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
180.8
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
180.1
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
176.6
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
176.5
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
175.2
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
175.0
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
175.0
GTEX-1128S-2726-SM-5H12C
60-69 years, female
174.4
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
171.6
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
169.9
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
169.2
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
167.2
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
166.3
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
165.3
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
164.6
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
164.5
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
164.1
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
163.1
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
162.9
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
162.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
159.8
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
158.4
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
158.0
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
155.7
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
154.7
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
154.3
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
153.3
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
153.0
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
152.2
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
149.3
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
147.0
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
145.8
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
145.3
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
144.5
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
142.3
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
133.9
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
130.6
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
129.0
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
126.3
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
124.1
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
120.1
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
116.1
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
114.3
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
105.6
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
99.7
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
83.6
Show all
Brain - Frontal Cortex (BA9) RPKM: 197.3
Samples: 108
Max RPKM: 381.2
Min RPKM: 78.6
Std RPKM: 48.4
Median RPKM: 192.9
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
381.2
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
341.0
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
306.3
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
297.3
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
270.9
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
269.3
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
268.5
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
263.5
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
261.8
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
259.7
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
249.5
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
248.1
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
247.0
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
246.3
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
241.5
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
237.7
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
237.3
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
236.9
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
236.3
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
235.4
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
234.4
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
234.4
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
233.4
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
232.7
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
230.5
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
227.0
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
226.4
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
226.2
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
222.6
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
221.7
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
221.5
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
221.5
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
221.5
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
219.2
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
218.1
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
217.1
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
215.0
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
214.7
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
212.4
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
209.4
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
208.5
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
207.8
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
207.5
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
206.9
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
206.9
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
206.8
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
206.0
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
204.8
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
204.5
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
202.6
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
201.8
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
198.8
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
193.9
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
193.1
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
192.7
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
192.0
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
191.1
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
190.5
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
190.1
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
189.7
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
189.0
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
188.8
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
187.7
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
187.3
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
186.2
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
182.7
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
182.7
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
182.1
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
181.8
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
180.2
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
178.8
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
177.4
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
177.1
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
176.1
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
175.2
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
172.3
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
172.2
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
171.6
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
171.2
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
169.6
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
169.6
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
168.2
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
167.8
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
166.4
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
163.2
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
161.6
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
157.7
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
157.3
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
155.0
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
153.2
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
153.1
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
152.8
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
147.6
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
146.4
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
143.0
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
141.4
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
138.0
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
135.5
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
135.3
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
133.7
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
132.9
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
127.1
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
125.8
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
123.6
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
111.7
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
99.9
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
82.6
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
78.6
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.