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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 312.4
Min RPKM: 72.7
Std RPKM: 48.2
Median RPKM: 171.7
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
312.4
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
310.5
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
291.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
261.8
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
258.3
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
256.6
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
256.4
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
242.8
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
237.5
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
235.7
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
231.6
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
229.4
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
224.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
222.8
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
219.8
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
218.5
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
217.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
215.7
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
214.1
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
211.0
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
210.5
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
207.8
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
207.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
206.9
GTEX-12WSB-0011-R5b-SM-5GU67
60-69 years, female
206.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
203.0
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
202.3
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
201.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
201.5
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
200.1
GTEX-XOTO-0011-R5A-SM-4B657
50-59 years, male
197.7
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
195.3
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
194.5
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
193.5
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
192.2
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
192.0
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
189.1
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
187.7
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
187.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
187.0
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
186.2
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
185.8
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
183.4
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
181.4
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
181.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
180.9
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
180.6
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
176.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
176.3
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
175.9
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
175.1
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
174.5
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
174.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
174.1
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
172.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
172.2
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
172.2
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
172.0
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
171.7
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
170.2
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
169.8
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
169.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
166.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
166.5
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
166.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
165.6
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
165.4
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
164.8
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
164.8
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
158.9
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
158.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
158.4
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
158.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
155.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
154.4
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
153.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
152.1
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
151.7
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
150.0
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
148.0
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
147.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
146.3
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
145.9
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
144.5
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
142.8
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
139.1
GTEX-OHPN-0011-R5A-SM-2I5FF
60-69 years, female
138.2
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
135.7
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
133.3
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
132.1
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
130.8
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
130.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
130.1
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
129.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
129.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
128.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
126.3
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
125.7
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
119.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
114.7
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
114.5
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
112.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
111.4
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
109.2
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
109.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
107.0
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
106.2
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
99.0
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
95.7
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
94.8
GTEX-RVPU-0011-R5A-SM-2XCAD
50-59 years, male
89.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
85.0
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
84.2
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
81.1
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
80.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
73.6
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
72.7
Show all
CAUDATE - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.