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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 214.7
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 125.8
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 238.5
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 543.0
Min RPKM: 66.1
Std RPKM: 83.1
Median RPKM: 207.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
543.0
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
509.1
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
453.5
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
453.0
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
443.9
GTEX-11OF3-1926-SM-59889
60-69 years, male
442.1
GTEX-WFON-1826-SM-3GILG
40-49 years, male
433.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
411.4
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
404.4
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
386.2
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
376.4
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
361.8
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
352.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
349.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
346.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
345.6
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
342.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
340.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
339.2
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
335.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
330.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
330.2
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
326.6
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
321.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
318.3
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
317.4
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
315.2
GTEX-13113-1726-SM-5GCOO
60-69 years, female
314.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
314.6
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
314.1
GTEX-11EI6-0626-SM-5985T
60-69 years, male
312.2
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
311.9
GTEX-QVJO-1826-SM-447C9
60-69 years, female
311.4
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
310.6
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
309.9
GTEX-14753-2426-SM-5LU8U
60-69 years, male
307.5
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
305.5
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
302.6
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
301.5
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
293.8
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
286.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
286.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
285.4
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
278.1
GTEX-X261-0626-SM-3NMD9
50-59 years, male
277.0
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
274.9
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
267.6
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
266.8
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
266.7
GTEX-RU72-0626-SM-46MUI
50-59 years, female
262.0
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
259.7
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
259.4
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
259.3
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
258.8
GTEX-144GM-0926-SM-5O994
20-29 years, male
257.3
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
256.5
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
255.0
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
253.2
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
251.9
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
251.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
250.0
GTEX-TML8-1226-SM-32QON
40-49 years, female
248.9
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
248.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
248.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
245.7
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
244.5
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
243.2
GTEX-R53T-1526-SM-48FEK
50-59 years, female
243.2
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
242.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
241.8
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
241.3
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
239.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
239.7
GTEX-11P81-1926-SM-5BC53
30-39 years, female
237.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
234.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
232.0
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
231.2
GTEX-1192X-2326-SM-5987X
50-59 years, male
230.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
230.1
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
229.3
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
228.6
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
228.4
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
227.8
GTEX-117YX-1426-SM-5H12H
50-59 years, male
227.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
227.3
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
227.1
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
226.9
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
226.5
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
226.0
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
223.8
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
223.6
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
222.8
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
222.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
222.2
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
222.1
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
221.0
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
219.9
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
218.6
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
218.5
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
217.0
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
216.6
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
216.4
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
216.4
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
215.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
213.1
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
210.2
GTEX-R55D-0826-SM-48FEA
50-59 years, male
207.2
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
207.1
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
206.3
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
204.7
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
202.9
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
200.6
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
200.3
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
200.0
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
199.9
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
198.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
196.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
196.3
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
194.8
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
194.6
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
194.1
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
193.4
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
192.4
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
192.1
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
191.8
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
191.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
190.7
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
190.6
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
190.4
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
189.1
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
188.2
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
187.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
187.7
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
186.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
186.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
185.4
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
184.5
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
184.0
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
183.8
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
183.3
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
181.3
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
181.2
GTEX-QEL4-2126-SM-447AE
50-59 years, male
180.3
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
180.2
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
179.3
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
179.1
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
178.7
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
176.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
176.0
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
175.2
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
174.9
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
174.5
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
171.4
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
169.4
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
169.4
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
168.4
GTEX-1122O-1226-SM-5H113
60-69 years, female
167.7
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
167.1
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
165.4
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
161.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
160.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
159.8
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
159.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
159.0
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
158.9
GTEX-111YS-1926-SM-5GICC
60-69 years, male
156.3
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
155.6
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
155.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
155.3
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
153.8
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
152.7
GTEX-REY6-2426-SM-48FF5
60-69 years, male
152.5
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
151.9
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
151.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
151.0
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
149.7
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
148.3
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
148.0
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
146.2
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
145.6
GTEX-11P82-1326-SM-5HL62
20-29 years, male
144.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
143.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
143.6
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
140.2
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
139.6
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
139.6
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
137.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
137.3
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
135.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
134.3
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
132.4
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
128.9
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
125.3
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
124.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
123.8
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
122.8
GTEX-T6MN-0726-SM-32PML
50-59 years, male
122.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
116.5
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
116.0
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
115.6
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
115.0
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
109.8
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
105.8
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
104.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
102.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
100.8
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
100.1
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
93.5
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
92.0
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
91.1
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
83.7
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
78.6
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
72.7
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
66.1
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.