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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 2 TPM: 10018.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
Male, age 62
Sample 3 TPM: 4985.9
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 34
Sample 4 TPM: 3132.4
Cell types%
Cells in seminiferous ducts: 60 Other cell types: 40
Male, age 26
Sample 5 TPM: 15173.7
Cell types%
Cells in seminiferous ducts: 55 Other cell types: 45
Male, age 50
Sample 6 TPM: 12887.7
Cell types%
Cells in seminiferous ducts: 85 Other cell types: 15
Male, age 37
Sample 7 TPM: 9462.9
Cell types%
Cells in seminiferous ducts: 35 Other cell types: 65
Male, age 51
Sample 8 TPM: 5504.2
Cell types%
Cells in seminiferous ducts: 65 Other cell types: 35
Male, age 34
Sample 9 TPM: 11531.5
Cell types%
Cells in seminiferous ducts: 70 Other cell types: 30
Male, age 26
Sample 10 TPM: 13710.9
Cell types%
Cells in seminiferous ducts: 75 Other cell types: 25
TESTIS - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 21197.2
Min RPKM: 687.5
Std RPKM: 4020.5
Median RPKM: 9089.2
GTEX-117YW-1526-SM-5EGGP
50-59 years, male
21197.2
GTEX-13FHP-2826-SM-5IJFW
50-59 years, male
19263.6
GTEX-11ZUS-2726-SM-5FQUA
30-39 years, male
18818.1
GTEX-14ABY-0626-SM-5Q5C9
50-59 years, male
18711.0
GTEX-111VG-1926-SM-5GIDO
60-69 years, male
18509.6
GTEX-11NV4-1726-SM-5N9FC
60-69 years, male
18398.6
GTEX-S7PM-0626-SM-4AD4Q
60-69 years, male
18106.3
GTEX-ZQUD-2026-SM-51MSM
30-39 years, male
17668.8
GTEX-11OF3-1826-SM-5987N
60-69 years, male
17489.1
GTEX-11EQ8-1426-SM-5EGJR
60-69 years, male
17303.6
GTEX-QEG4-0126-SM-48TZE
30-39 years, male
16874.4
GTEX-12WSH-0326-SM-5GCNH
50-59 years, male
16556.4
GTEX-13OW5-2526-SM-5L3I1
60-69 years, male
16313.0
GTEX-13112-0226-SM-5P9IV
50-59 years, male
16216.7
GTEX-12WSL-2326-SM-5DUXQ
50-59 years, male
15702.7
GTEX-N7MS-0126-SM-3TW8O
60-69 years, male
15569.3
GTEX-139TS-1726-SM-5IJG5
60-69 years, male
14647.9
GTEX-111FC-1926-SM-5GZYC
60-69 years, male
14493.8
GTEX-1339X-1926-SM-5PNVP
40-49 years, male
14247.4
GTEX-11NUK-2626-SM-5A5MB
50-59 years, male
13989.0
GTEX-S95S-1126-SM-4B64E
60-69 years, male
13762.4
GTEX-12ZZY-0126-SM-5LZV2
60-69 years, male
13740.7
GTEX-13111-1526-SM-5EGJX
50-59 years, male
13306.0
GTEX-13OVL-0426-SM-5IFG6
50-59 years, male
13282.6
GTEX-Q2AI-1226-SM-48U14
40-49 years, male
13058.0
GTEX-13N1W-2626-SM-5IJEP
70-79 years, male
12942.9
GTEX-11EQ9-1926-SM-5PNVV
30-39 years, male
12855.1
GTEX-XAJ8-1326-SM-47JYT
40-49 years, male
12839.2
GTEX-111YS-2026-SM-5EGGL
60-69 years, male
12769.0
GTEX-ZAB5-2426-SM-5CVMW
50-59 years, male
12750.5
GTEX-ZA64-1626-SM-5CVME
20-29 years, male
12747.1
GTEX-WZTO-0326-SM-4PQYZ
40-49 years, male
12626.7
GTEX-11DXZ-2126-SM-59881
50-59 years, male
12567.2
GTEX-11WQC-2326-SM-5EQKE
60-69 years, male
12560.9
GTEX-WK11-0326-SM-4OOS6
50-59 years, male
12457.2
GTEX-OOBK-2126-SM-3LK5T
40-49 years, male
12195.8
GTEX-ZZ64-1126-SM-5GZXY
20-29 years, male
12144.7
GTEX-12WSI-2126-SM-5GCMV
50-59 years, male
11832.2
GTEX-11TT1-2226-SM-5GU6B
20-29 years, male
11811.9
GTEX-13O21-1226-SM-5J2MK
50-59 years, male
11754.1
GTEX-ZYT6-2726-SM-5GICP
30-39 years, male
11687.4
GTEX-WOFM-1126-SM-4OOSB
20-29 years, male
11671.5
GTEX-144GL-0726-SM-5LU4P
50-59 years, male
11669.8
GTEX-11NSD-1026-SM-5N9BE
20-29 years, male
11657.3
GTEX-XQ3S-2726-SM-4BOP2
20-29 years, male
11649.5
GTEX-ZVTK-0126-SM-57WDG
20-29 years, male
11540.4
GTEX-REY6-0126-SM-48FDT
60-69 years, male
11513.7
GTEX-13O1R-0726-SM-5IJEI
60-69 years, male
11473.9
GTEX-V955-1926-SM-4KL1L
60-69 years, male
11473.2
GTEX-ZPU1-2126-SM-57WED
40-49 years, male
11458.0
GTEX-11TUW-2226-SM-5EQL9
60-69 years, male
11399.8
GTEX-PW2O-1426-SM-48TCD
20-29 years, male
11305.5
GTEX-QEG5-0126-SM-4R1JR
20-29 years, male
11285.2
GTEX-T6MN-2026-SM-4DM7L
50-59 years, male
11265.5
GTEX-ZUA1-2726-SM-59HLJ
40-49 years, male
11075.4
GTEX-XLM4-1526-SM-4AT6D
60-69 years, male
11016.3
GTEX-1212Z-0326-SM-5FQSJ
60-69 years, male
11002.0
GTEX-11GS4-2026-SM-5N9CP
60-69 years, male
10994.0
GTEX-YEC3-1726-SM-5IFIK
50-59 years, male
10686.3
GTEX-ZTSS-1526-SM-51MTC
40-49 years, male
10658.1
GTEX-13NZB-2026-SM-5MR4M
30-39 years, male
10641.9
GTEX-TKQ2-1526-SM-4DXUN
50-59 years, male
10634.5
GTEX-111CU-1726-SM-5EGHM
50-59 years, male
10616.3
GTEX-T5JC-0726-SM-4DM55
20-29 years, male
10557.4
GTEX-Y111-2426-SM-4TT23
50-59 years, male
10465.4
GTEX-13FLW-2126-SM-5N9FD
50-59 years, male
10296.6
GTEX-UPJH-0126-SM-4IHLL
50-59 years, male
10293.8
GTEX-Y5V6-1726-SM-4VDSZ
60-69 years, male
10216.6
GTEX-ZDYS-1326-SM-5IJFF
50-59 years, male
10189.2
GTEX-11WQK-2826-SM-5EQKH
50-59 years, male
10179.1
GTEX-ZVZP-2226-SM-57WBF
50-59 years, male
10163.3
GTEX-117XS-2026-SM-5GID1
60-69 years, male
10151.2
GTEX-11P82-1526-SM-5BC5M
20-29 years, male
10129.8
GTEX-XBEC-0126-SM-4GIDT
50-59 years, male
10103.7
GTEX-13NZA-2526-SM-5IJFX
60-69 years, male
10050.2
GTEX-144GM-0426-SM-5Q5C8
20-29 years, male
10008.2
GTEX-12C56-1426-SM-5FQSW
20-29 years, male
9834.3
GTEX-SUCS-1326-SM-4DM5T
70-79 years, male
9737.6
GTEX-12696-0226-SM-5EGL3
60-69 years, male
9645.7
GTEX-XGQ4-2026-SM-4AT6G
50-59 years, male
9512.1
GTEX-U8T8-1126-SM-4DXUE
60-69 years, male
9430.6
GTEX-WH7G-1926-SM-4LVMM
40-49 years, male
9366.2
GTEX-OOBJ-2126-SM-3NB1N
60-69 years, male
9336.9
GTEX-144GN-1626-SM-5Q5BU
50-59 years, male
9117.2
GTEX-Q2AH-1526-SM-48TZG
40-49 years, male
9100.2
GTEX-Z93S-1726-SM-5HL8G
50-59 years, male
9095.0
GTEX-TKQ1-0926-SM-4DXU2
30-39 years, male
9083.4
GTEX-S4Q7-1226-SM-4AD5I
20-29 years, male
9061.5
GTEX-13N2G-0126-SM-5N9DV
60-69 years, male
9058.9
GTEX-ZT9W-2226-SM-57WFU
50-59 years, male
8924.9
GTEX-U8XE-0126-SM-4E3I3
30-39 years, male
8886.4
GTEX-R55C-1426-SM-48FED
40-49 years, male
8855.3
GTEX-131XE-0426-SM-5IJF4
50-59 years, male
8846.7
GTEX-14753-0626-SM-5Q5CY
60-69 years, male
8819.3
GTEX-X3Y1-2626-SM-4PQZI
40-49 years, male
8794.4
GTEX-13VXU-0726-SM-5J2O7
50-59 years, male
8790.7
GTEX-X5EB-2026-SM-4E3KA
40-49 years, male
8776.8
GTEX-OXRL-2126-SM-3NM98
50-59 years, male
8757.1
GTEX-XPT6-1626-SM-4B655
20-29 years, male
8747.9
GTEX-QV31-1126-SM-4R1K4
30-39 years, male
8701.9
GTEX-11LCK-2326-SM-5HL53
30-39 years, male
8676.6
GTEX-R55D-0126-SM-48FEL
50-59 years, male
8577.9
GTEX-RWSA-2426-SM-47JXR
40-49 years, male
8411.1
GTEX-S7SE-0326-SM-4AT5Q
50-59 years, male
8245.5
GTEX-RUSQ-2126-SM-47JXK
50-59 years, male
8057.0
GTEX-Y8E4-2226-SM-5LU94
40-49 years, male
7856.8
GTEX-13OVH-0726-SM-5N9BU
70-79 years, male
7829.5
GTEX-132QS-1226-SM-5P9GD
60-69 years, male
7784.4
GTEX-139T6-1226-SM-5IFFC
50-59 years, male
7774.3
GTEX-QLQW-1026-SM-447A9
30-39 years, male
7773.3
GTEX-P4QS-2126-SM-3NMCF
60-69 years, male
7769.0
GTEX-OHPM-2126-SM-3LK75
50-59 years, male
7701.3
GTEX-U4B1-1526-SM-4DXSL
40-49 years, male
7334.5
GTEX-11O72-0726-SM-5P9GO
40-49 years, male
7286.5
GTEX-13O61-2026-SM-5J2M6
60-69 years, male
7270.4
GTEX-QMRM-1526-SM-4R1K6
50-59 years, male
7247.3
GTEX-SNOS-1126-SM-4DM67
40-49 years, male
7228.6
GTEX-ZYFC-0126-SM-5GIEH
50-59 years, male
7224.5
GTEX-ZV7C-2026-SM-5NQ8F
50-59 years, male
7215.0
GTEX-OIZI-0126-SM-3NB13
40-49 years, male
7213.4
GTEX-147JS-0126-SM-5S2TW
60-69 years, male
7148.9
GTEX-145MO-0126-SM-5S2QU
60-69 years, male
7143.0
GTEX-WVLH-2626-SM-4MVNV
50-59 years, male
7120.3
GTEX-YB5E-1926-SM-5IFIG
40-49 years, male
7038.5
GTEX-WHSB-2126-SM-4M1XF
50-59 years, male
7008.2
GTEX-XMK1-2026-SM-4B65K
40-49 years, male
6999.5
GTEX-T8EM-0126-SM-4DM5R
40-49 years, male
6998.0
GTEX-OIZH-2126-SM-3NB1P
50-59 years, male
6908.7
GTEX-11EI6-2226-SM-5EGJM
60-69 years, male
6803.4
GTEX-V1D1-2126-SM-4JBH4
50-59 years, male
6774.6
GTEX-XPVG-2226-SM-4B65U
50-59 years, male
6774.6
GTEX-Y9LG-1726-SM-4VBQE
30-39 years, male
6681.8
GTEX-XBED-2026-SM-4AT5D
60-69 years, male
6499.2
GTEX-145MH-2326-SM-5O9AW
50-59 years, male
6273.9
GTEX-NFK9-0126-SM-3LK5H
40-49 years, male
6113.0
GTEX-13FTW-1326-SM-5LZZD
40-49 years, male
6018.1
GTEX-SNMC-1026-SM-4DM7K
20-29 years, male
5892.8
GTEX-X261-2326-SM-4PQYU
50-59 years, male
5886.2
GTEX-ZT9X-1426-SM-5DUX1
40-49 years, male
5711.9
GTEX-R55E-0726-SM-48FCZ
20-29 years, male
5683.1
GTEX-YEC4-1526-SM-4W1YU
40-49 years, male
5548.4
GTEX-11P7K-1026-SM-5HL6Y
30-39 years, male
5492.8
GTEX-RM2N-1326-SM-48FCW
50-59 years, male
5421.6
GTEX-13NYB-2226-SM-5MR58
40-49 years, male
5275.2
GTEX-WFG8-1926-SM-4LVM1
20-29 years, male
5135.6
GTEX-YF7O-2026-SM-4W1YE
50-59 years, male
5132.5
GTEX-QLQ7-1426-SM-4R1JX
60-69 years, male
5103.8
GTEX-S3XE-1526-SM-4AD5A
50-59 years, male
5002.1
GTEX-U3ZM-1626-SM-4DXSK
40-49 years, male
4926.6
GTEX-11ONC-2226-SM-5HL6D
60-69 years, male
4808.3
GTEX-QV44-1726-SM-4R1KG
50-59 years, male
4668.5
GTEX-139TT-2226-SM-5LZWO
60-69 years, male
4630.3
GTEX-WFON-2026-SM-4LVMW
40-49 years, male
4190.9
GTEX-PLZ5-1526-SM-3P5ZX
50-59 years, male
4177.1
GTEX-P4QR-0226-SM-3NMCH
60-69 years, male
3946.2
GTEX-S33H-0126-SM-4AD62
30-39 years, male
3818.5
GTEX-12WSM-1326-SM-5GCP9
60-69 years, male
3804.6
GTEX-ZTX8-1126-SM-51MRM
20-29 years, male
3766.3
GTEX-1399R-1626-SM-5P9GG
30-39 years, male
3705.7
GTEX-13OW6-0126-SM-5IJGM
50-59 years, male
3650.8
GTEX-145LT-0426-SM-5LUAP
40-49 years, male
3529.1
GTEX-ZAB4-0126-SM-5CVMG
40-49 years, male
3511.8
GTEX-YJ89-0626-SM-4TT3Z
60-69 years, male
3445.1
GTEX-U3ZH-1526-SM-4DXV1
30-39 years, male
3323.3
GTEX-1399Q-2826-SM-5IJEZ
40-49 years, male
3192.3
GTEX-RN64-2326-SM-48FDW
50-59 years, male
3000.1
GTEX-147F4-0626-SM-5LUAK
50-59 years, male
2976.6
GTEX-O5YT-2126-SM-3MJGD
20-29 years, male
2788.7
GTEX-VJYA-1426-SM-4KL1Y
60-69 years, male
2445.1
GTEX-YFCO-1726-SM-4W21S
40-49 years, male
2159.2
GTEX-14A6H-2326-SM-5Q5B5
30-39 years, male
1548.1
GTEX-ZDTT-2026-SM-5K7TY
60-69 years, male
687.5
Show all
TESTIS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.