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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 180.6
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 238.7
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 156.8
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 179.6
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 287.9
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 154.8
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 267.5
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 274
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 326.4
Min RPKM: 4.2
Std RPKM: 68.8
Median RPKM: 91.8
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
326.4
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
323.2
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
300.1
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
289.7
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
254.9
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
254.5
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
237.6
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
229.7
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
229.6
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
224.3
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
222.1
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
219.9
GTEX-R53T-0326-SM-48FEC
50-59 years, female
219.5
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
219.3
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
219.1
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
215.8
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
206.2
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
193.8
GTEX-Q734-0326-SM-48U15
40-49 years, female
183.3
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
182.7
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
179.0
GTEX-RU72-1426-SM-46MUF
50-59 years, female
171.8
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
171.4
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
162.3
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
158.2
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
155.5
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
153.3
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
150.7
GTEX-S33H-1626-SM-4AD68
30-39 years, male
144.8
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
142.8
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
142.5
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
142.3
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
138.0
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
131.3
GTEX-1399T-0826-SM-5IFES
60-69 years, male
128.3
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
125.9
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
123.2
GTEX-P78B-1326-SM-3P611
40-49 years, female
122.1
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
120.4
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
120.1
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
118.9
GTEX-REY6-1226-SM-48FDR
60-69 years, male
118.2
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
116.0
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
113.6
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
111.6
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
111.5
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
108.3
GTEX-X261-1726-SM-4PQYT
50-59 years, male
105.9
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
105.8
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
104.8
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
104.4
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
102.3
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
102.2
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
101.8
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
101.3
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
99.7
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
98.5
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
95.2
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
95.0
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
91.8
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
91.1
GTEX-QEL4-1226-SM-447A4
50-59 years, male
90.8
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
90.5
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
90.3
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
90.1
GTEX-YECK-1926-SM-4W21H
60-69 years, male
89.5
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
88.3
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
87.2
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
86.0
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
81.4
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
81.4
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
77.4
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
76.2
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
76.1
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
75.9
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
75.4
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
75.4
GTEX-QESD-2026-SM-447BI
20-29 years, male
75.2
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
74.2
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
73.2
GTEX-13113-1326-SM-5GCOI
60-69 years, female
73.0
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
69.7
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
67.1
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
67.1
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
66.6
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
65.1
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
64.9
GTEX-12696-0826-SM-5EGGE
60-69 years, male
62.5
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
61.2
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
61.2
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
58.1
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
58.0
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
57.6
GTEX-RN64-1826-SM-48FDV
50-59 years, male
57.0
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
56.9
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
54.0
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
53.4
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
52.8
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
52.3
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
51.9
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
51.6
GTEX-11GSP-0626-SM-5986T
60-69 years, female
47.7
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
47.6
GTEX-S32W-1926-SM-4AD63
50-59 years, female
46.9
GTEX-13112-1426-SM-5EGH8
50-59 years, male
45.7
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
45.4
GTEX-11ZUS-2526-SM-59872
30-39 years, male
42.0
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
41.9
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
41.3
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
40.6
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
39.0
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
38.7
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
32.7
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
31.7
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
31.5
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
26.8
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
13.4
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
11.3
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
4.2
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
