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ATG13
COLON - Expression summary
RNA expressioni
HPA:26.2TPM
GTEx:10.6RPKM
FANTOM5:31.6Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 26.2
overview Male, age 54 Sample 1
TPM: 28.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 35.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 29.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 20.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 25.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 20.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 29.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 21.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 25.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 27.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 30.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 24.5
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 20.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 10.6
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 10.9
Samples: 149

Max RPKM: 19.3
Min RPKM: 5.9
Std RPKM: 1.9
Median RPKM: 10.9
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 19.3
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 16.6
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 15.9
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 15.4
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 15.2
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 15.1
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 14.8
GTEX-145MO-2626-SM-5QGPD 60-69 years, male 14.3
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 14.1
GTEX-145LS-2926-SM-5O99G 60-69 years, female 13.9
Show all
Colon - Transverse
RPKM: 10.4
Samples: 196

Max RPKM: 16.3
Min RPKM: 3.7
Std RPKM: 1.6
Median RPKM: 10.3
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 16.3
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 15.4
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 15.3
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 15.2
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 15.1
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 14.7
GTEX-S341-1426-SM-4AD6U 40-49 years, female 13.9
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 13.7
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 13.7
GTEX-1128S-1626-SM-5H12O 60-69 years, female 13.5
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 31.6
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 20.7
FF:10014-101C5 62,83,84 years, mixed 31.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.