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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 583.9
Min RPKM: 66.0
Std RPKM: 121.3
Median RPKM: 264.4
GTEX-11I78-1926-SM-59878
50-59 years, female
583.9
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
575.4
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
558.1
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
517.9
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
502.0
GTEX-S341-0726-SM-4AD5R
40-49 years, female
475.7
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
472.0
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
467.2
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
467.1
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
460.3
GTEX-QCQG-1426-SM-48U22
50-59 years, female
440.6
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
427.8
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
407.6
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
402.3
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
398.2
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
392.5
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
386.7
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
382.4
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
380.2
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
369.9
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
366.1
GTEX-RU72-2226-SM-46MUE
50-59 years, female
361.3
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
360.6
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
359.9
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
347.4
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
339.9
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
338.0
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
337.8
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
337.2
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
330.7
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
327.4
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
326.4
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
314.6
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
313.4
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
305.0
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
304.0
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
297.5
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
297.3
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
289.2
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
288.1
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
281.2
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
280.9
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
280.4
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
278.6
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
274.3
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
272.6
GTEX-P78B-1926-SM-3P616
40-49 years, female
270.9
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
269.5
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
264.4
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
262.8
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
262.3
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
260.5
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
256.3
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
256.2
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
250.4
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
241.4
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
236.5
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
235.9
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
233.3
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
233.3
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
229.8
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
226.2
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
221.3
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
215.0
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
204.6
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
204.2
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
199.5
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
191.1
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
185.1
GTEX-Q734-0726-SM-48TZP
40-49 years, female
184.3
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
182.9
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
179.5
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
179.1
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
174.0
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
173.5
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
170.6
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
168.6
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
166.2
GTEX-S32W-1226-SM-4AD67
50-59 years, female
157.3
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
153.7
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
129.2
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
128.8
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
126.7
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
123.8
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
120.9
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
120.2
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
117.8
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
117.0
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
116.5
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
115.8
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
105.0
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
102.6
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
100.9
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
96.1
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
91.1
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
78.0
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
66.0
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.