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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 60.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1.4
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 3.3
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 930.0
Min RPKM: 6.7
Std RPKM: 122.4
Median RPKM: 80.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
930.0
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
628.0
GTEX-R55D-0826-SM-48FEA
50-59 years, male
568.6
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
535.9
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
535.8
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
481.4
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
436.6
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
431.2
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
426.1
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
424.5
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
405.5
GTEX-11P82-1326-SM-5HL62
20-29 years, male
346.2
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
305.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
283.5
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
280.2
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
273.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
264.1
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
259.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
248.2
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
244.9
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
237.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
235.5
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
234.5
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
224.7
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
217.0
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
216.2
GTEX-1122O-1226-SM-5H113
60-69 years, female
208.7
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
207.9
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
207.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
206.4
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
205.3
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
204.9
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
201.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
201.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
200.3
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
197.1
GTEX-REY6-2426-SM-48FF5
60-69 years, male
196.6
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
194.7
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
194.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
187.6
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
182.5
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
177.3
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
175.2
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
174.6
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
174.1
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
172.9
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
166.1
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
165.3
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
165.0
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
159.5
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
158.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
158.0
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
156.7
GTEX-14753-2426-SM-5LU8U
60-69 years, male
154.9
GTEX-117YX-1426-SM-5H12H
50-59 years, male
154.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
152.3
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
152.1
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
151.7
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
150.7
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
150.1
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
146.5
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
146.5
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
138.2
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
135.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
133.4
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
133.0
GTEX-11OF3-1926-SM-59889
60-69 years, male
130.8
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
129.5
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
128.8
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
125.7
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
125.2
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
124.6
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
122.9
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
121.2
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
119.4
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
118.7
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
116.6
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
110.2
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
109.3
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
109.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
108.9
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
107.5
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
104.8
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
104.7
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
102.1
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
101.8
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
101.2
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
101.0
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
100.9
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
100.3
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
99.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
99.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
99.1
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
99.1
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
98.6
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
95.4
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
95.2
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
94.4
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
93.1
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
90.3
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
86.2
GTEX-QVJO-1826-SM-447C9
60-69 years, female
84.1
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
83.8
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
83.2
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
82.8
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
82.4
GTEX-11P81-1926-SM-5BC53
30-39 years, female
81.3
GTEX-S341-1526-SM-4AD6K
40-49 years, female
79.7
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
79.4
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
78.1
GTEX-117XS-1926-SM-5GICO
60-69 years, male
77.5
GTEX-XBED-1626-SM-47JYN
60-69 years, male
77.1
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
76.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
76.7
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
76.6
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
76.0
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
75.9
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
75.8
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
74.2
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
72.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
70.4
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
70.3
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
69.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
68.0
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
67.4
GTEX-11EI6-0626-SM-5985T
60-69 years, male
67.0
GTEX-T6MN-0726-SM-32PML
50-59 years, male
66.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
66.7
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
66.1
GTEX-13113-1726-SM-5GCOO
60-69 years, female
63.8
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
62.6
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
62.6
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
61.5
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
60.1
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
58.4
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
58.3
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
58.1
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
57.6
GTEX-R53T-1526-SM-48FEK
50-59 years, female
56.7
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
56.6
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
56.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
53.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
52.7
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
51.7
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
50.1
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
49.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
48.2
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
47.7
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
46.8
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
45.8
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
45.7
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
45.4
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
45.1
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
44.0
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
43.6
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
43.3
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
43.0
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
42.0
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
41.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
40.3
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
39.9
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
38.7
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
38.3
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
38.2
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
38.0
GTEX-111YS-1926-SM-5GICC
60-69 years, male
36.7
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
36.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
36.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
35.7
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
35.3
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
35.1
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
34.2
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
33.0
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
32.4
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
31.4
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
29.7
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
29.1
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
29.1
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
28.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
28.0
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
28.0
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
27.6
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
27.5
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
26.2
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
25.9
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
25.0
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
24.9
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
23.7
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
22.5
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
21.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
20.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
20.9
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
20.4
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
20.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
20.0
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
19.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
19.0
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
17.7
GTEX-QEL4-2126-SM-447AE
50-59 years, male
17.7
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
17.7
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
16.3
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
16.1
GTEX-1192X-2326-SM-5987X
50-59 years, male
16.0
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
16.0
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
15.9
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
14.5
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
13.9
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
12.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
12.3
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
11.9
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
11.7
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
10.2
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
9.1
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
6.7
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.