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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 300.6
Min RPKM: 104.1
Std RPKM: 35.2
Median RPKM: 160.0
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
300.6
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
245.3
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
237.7
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
223.3
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
223.3
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
218.8
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
218.3
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
216.1
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
215.7
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
214.3
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
208.5
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
204.0
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
201.6
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
195.6
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
195.4
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
194.8
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
194.7
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
192.8
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
191.7
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
190.5
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
187.3
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
185.9
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
185.6
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
184.5
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
183.6
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
182.5
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
182.2
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
181.9
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
181.9
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
181.4
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
179.5
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
175.6
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
175.5
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
174.2
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
173.9
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
173.0
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
170.8
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
169.7
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
168.7
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
168.4
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
165.0
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
163.9
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
162.3
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
161.9
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
161.1
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
160.9
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
160.9
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
160.0
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
159.9
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
159.4
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
157.2
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
157.1
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
156.1
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
155.1
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
154.5
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
152.1
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
151.8
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
151.2
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
149.1
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
148.8
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
148.3
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
146.6
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
145.5
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
144.6
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
143.3
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
143.0
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
142.2
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
140.7
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
140.3
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
138.6
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
136.7
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
136.6
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
135.0
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
134.1
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
132.9
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
130.8
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
128.0
GTEX-11I78-2026-SM-5987C
50-59 years, female
126.6
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
126.5
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
125.3
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
124.5
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
122.8
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
122.3
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
121.9
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
121.6
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
121.0
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
120.3
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
119.3
GTEX-S341-1226-SM-4AD5S
40-49 years, female
118.2
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
116.1
GTEX-QCQG-1226-SM-48U23
50-59 years, female
116.0
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
114.9
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
114.3
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
111.1
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
107.1
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
104.1
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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