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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 216.0
Min RPKM: 0.1
Std RPKM: 47.6
Median RPKM: 42.6
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
216.0
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
209.9
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
188.1
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
186.2
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
139.4
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
128.1
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
119.2
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
115.7
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
106.8
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
106.5
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
100.7
GTEX-S341-1226-SM-4AD5S
40-49 years, female
96.1
GTEX-11I78-2026-SM-5987C
50-59 years, female
95.0
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
91.2
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
89.5
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
88.8
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
87.1
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
86.6
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
86.4
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
86.2
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
83.5
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
82.3
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
82.1
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
79.4
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
77.6
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
76.7
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
74.9
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
73.3
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
72.4
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
72.3
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
68.0
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
66.0
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
63.7
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
63.6
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
61.1
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
59.5
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
57.4
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
57.2
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
56.0
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
52.4
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
52.1
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
52.0
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
51.2
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
51.0
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
46.5
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
45.5
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
44.3
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
43.4
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
41.7
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
41.4
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
39.7
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
38.7
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
38.0
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
37.3
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
31.1
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
31.0
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
29.3
GTEX-QCQG-1226-SM-48U23
50-59 years, female
26.3
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
24.5
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
24.1
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
23.2
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
23.2
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
21.9
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
21.5
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
21.1
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
20.6
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
19.9
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
19.1
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
18.8
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
18.2
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
17.4
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
12.7
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
8.0
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
6.2
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
3.1
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
1.6
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
1.5
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
1.4
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
1.2
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
1.0
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
1.0
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
1.0
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
0.9
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
0.8
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
0.8
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
0.6
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
0.6
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
0.5
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
0.4
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
0.4
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
0.4
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
0.4
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
0.4
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
0.3
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
0.2
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
0.1
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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