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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1333.5
Min RPKM: 457.5
Std RPKM: 194.9
Median RPKM: 741.2
GTEX-QVJO-3126-SM-4R1KC
60-69 years, female
1333.5
GTEX-RTLS-2326-SM-46MUH
60-69 years, female
1289.7
GTEX-1313W-2726-SM-5P9IX
50-59 years, female
1222.4
GTEX-X8HC-2726-SM-46MUA
50-59 years, female
1217.1
GTEX-13OVJ-2426-SM-5KM3I
50-59 years, female
1173.0
GTEX-ZVT3-2626-SM-5GU5L
60-69 years, female
1159.5
GTEX-TSE9-2226-SM-4DXUR
60-69 years, female
1130.1
GTEX-13OVI-0726-SM-5L3DD
60-69 years, female
1112.1
GTEX-ZAJG-2726-SM-5S2MU
50-59 years, female
1082.1
GTEX-131YS-2226-SM-5P9G8
60-69 years, female
1080.3
GTEX-PLZ4-2826-SM-3P617
50-59 years, female
1075.6
GTEX-12WSB-2226-SM-5GCOS
60-69 years, female
1074.6
GTEX-XMD3-2326-SM-4AT5H
50-59 years, female
1059.8
GTEX-1269C-1826-SM-5N9E1
60-69 years, female
1057.1
GTEX-YFC4-2726-SM-5IFJW
40-49 years, female
1050.9
GTEX-12ZZX-2026-SM-5LZV9
40-49 years, female
1050.0
GTEX-RU72-2226-SM-46MUE
50-59 years, female
1048.4
GTEX-11EMC-1726-SM-5H11P
60-69 years, female
1035.5
GTEX-11ZVC-1426-SM-5EGGA
50-59 years, female
1034.5
GTEX-13X6H-1026-SM-5SIBE
50-59 years, female
1020.0
GTEX-WWYW-2726-SM-4MVOP
50-59 years, female
965.3
GTEX-13QIC-1526-SM-5IJFL
60-69 years, female
914.5
GTEX-ZVT2-0326-SM-5E44G
50-59 years, female
910.8
GTEX-11P81-1526-SM-5P9GS
30-39 years, female
899.3
GTEX-13U4I-2126-SM-5LU55
40-49 years, female
892.6
GTEX-11ZTS-1926-SM-5CVLA
60-69 years, female
886.6
GTEX-12WSJ-1226-SM-5LU91
40-49 years, female
876.2
GTEX-OHPK-2426-SM-3MJGH
50-59 years, female
865.4
GTEX-14AS3-1326-SM-5RQJE
40-49 years, female
848.5
GTEX-YJ8O-1026-SM-5CVM5
40-49 years, female
846.3
GTEX-ZC5H-2026-SM-5CVN2
40-49 years, female
845.3
GTEX-W5WG-0926-SM-4RTX9
50-59 years, female
842.7
GTEX-11VI4-1026-SM-5EQM1
40-49 years, female
836.9
GTEX-11XUK-1626-SM-5GU5O
40-49 years, female
832.2
GTEX-XUJ4-1326-SM-4BOQ9
60-69 years, female
818.4
GTEX-11I78-1926-SM-59878
50-59 years, female
803.5
GTEX-11GSP-0226-SM-5A5KV
60-69 years, female
802.1
GTEX-13O3O-2726-SM-5KM35
60-69 years, female
790.4
GTEX-T2IS-2026-SM-4DM6W
20-29 years, female
784.0
GTEX-XYKS-1726-SM-4E3IO
60-69 years, female
781.9
GTEX-ZYFG-1726-SM-5GZZB
60-69 years, female
762.6
GTEX-WI4N-2526-SM-4OOSE
40-49 years, female
761.8
GTEX-PWN1-2426-SM-48TDD
40-49 years, female
752.5
GTEX-12WSK-1926-SM-5LZVK
40-49 years, female
745.1
GTEX-13W3W-1526-SM-5LU5I
60-69 years, female
744.4
GTEX-12WSD-2726-SM-59HLR
60-69 years, female
744.3
GTEX-U3ZN-1026-SM-4DXTC
30-39 years, female
744.1
GTEX-PX3G-2426-SM-48TZZ
20-29 years, female
741.8
GTEX-X4EO-2426-SM-4QASD
60-69 years, female
741.2
GTEX-11EM3-1726-SM-5N9D1
20-29 years, female
738.4
GTEX-S32W-1226-SM-4AD67
50-59 years, female
737.0
GTEX-ZP4G-0626-SM-4WWF1
20-29 years, female
736.3
GTEX-13QBU-1526-SM-5LU3W
40-49 years, female
736.0
GTEX-Y3IK-2026-SM-4YCDG
50-59 years, female
732.8
GTEX-P78B-1926-SM-3P616
40-49 years, female
727.4
GTEX-ZZPU-2126-SM-5EGIU
50-59 years, female
726.3
GTEX-ZPIC-1426-SM-4WWCP
40-49 years, female
723.2
GTEX-11DXX-1426-SM-5GIDU
60-69 years, female
717.1
GTEX-S4P3-0926-SM-4AD54
50-59 years, female
710.8
GTEX-TMMY-1726-SM-4DXTD
40-49 years, female
705.6
GTEX-13PL7-2326-SM-5L3FY
60-69 years, female
704.0
GTEX-X15G-1726-SM-4PQZN
50-59 years, female
701.7
GTEX-Y114-1726-SM-4TT7U
50-59 years, female
697.7
GTEX-12WSG-1426-SM-5FQUK
50-59 years, female
697.1
GTEX-S341-0726-SM-4AD5R
40-49 years, female
694.5
GTEX-ZLWG-0926-SM-4WWC3
50-59 years, female
691.1
GTEX-139D8-2426-SM-5KM3A
30-39 years, female
690.7
GTEX-PWCY-1326-SM-48TCU
20-29 years, female
685.9
GTEX-ZYWO-1926-SM-5E456
40-49 years, female
681.8
GTEX-13PVR-1226-SM-5RQJ2
60-69 years, female
680.8
GTEX-XUW1-0126-SM-4BOOQ
50-59 years, female
680.8
GTEX-RWS6-1026-SM-47JXD
60-69 years, female
678.1
GTEX-P4PP-2426-SM-3P61L
30-39 years, female
672.6
GTEX-13D11-1126-SM-5KLYS
50-59 years, female
672.0
GTEX-145ME-1226-SM-5SIB6
40-49 years, female
663.1
GTEX-13VXT-1526-SM-5LU3J
20-29 years, female
653.3
GTEX-UJHI-1226-SM-4IHLR
50-59 years, female
651.3
GTEX-P4QT-2426-SM-3NMCL
50-59 years, female
631.3
GTEX-T5JW-0426-SM-4DM7M
20-29 years, female
629.1
GTEX-XV7Q-1426-SM-4BRWA
40-49 years, female
618.4
GTEX-QCQG-1426-SM-48U22
50-59 years, female
598.5
GTEX-11ZTT-1826-SM-5CVLN
60-69 years, female
590.5
GTEX-TML8-0926-SM-4DXSJ
40-49 years, female
587.8
GTEX-132AR-1426-SM-5IFF1
50-59 years, female
585.1
GTEX-XUZC-1026-SM-4BOPY
30-39 years, female
573.7
GTEX-Q734-0726-SM-48TZP
40-49 years, female
564.8
GTEX-13FTX-0926-SM-5IFF7
20-29 years, female
563.1
GTEX-133LE-1226-SM-5IFGC
20-29 years, female
561.7
GTEX-POMQ-1426-SM-3P61D
20-29 years, female
558.6
GTEX-T6MO-1126-SM-4DM5D
40-49 years, female
558.3
GTEX-ZYY3-2726-SM-5EGH4
60-69 years, female
556.4
GTEX-13N11-0526-SM-5IJFI
50-59 years, female
547.3
GTEX-OHPL-2426-SM-48TDN
60-69 years, female
546.0
GTEX-1399S-2126-SM-5J2MH
30-39 years, female
541.6
GTEX-S7SF-1326-SM-4AD4P
20-29 years, female
525.9
GTEX-146FH-2526-SM-5Q5BP
50-59 years, female
523.7
GTEX-RU1J-0826-SM-46MUU
20-29 years, female
457.5
Show all
OVARY - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.