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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 303.9
Min RPKM: 58.7
Std RPKM: 48.2
Median RPKM: 165.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
303.9
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
278.0
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
261.2
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
261.0
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
256.9
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
249.7
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
246.4
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
244.1
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
236.7
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
236.3
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
232.6
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
219.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
218.2
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
215.9
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
215.2
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
207.6
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
206.4
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
202.4
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
200.9
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
199.9
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
199.8
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
196.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
192.8
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
191.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
188.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
187.7
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
186.0
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
185.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
185.4
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
185.1
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
185.0
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
184.8
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
184.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
179.2
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
178.7
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
178.3
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
177.8
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
177.6
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
177.4
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
176.8
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
175.8
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
175.7
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
174.5
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
172.8
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
171.5
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
166.4
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
165.2
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
165.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
161.6
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
159.2
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
158.3
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
157.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
157.2
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
156.7
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
155.9
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
154.5
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
152.6
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
151.7
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
149.7
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
148.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
148.2
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
143.8
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
142.6
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
142.2
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
142.0
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
141.1
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
141.1
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
139.1
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
134.1
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
131.1
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
130.9
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
129.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
129.1
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
127.1
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
125.7
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
124.0
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
120.8
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
119.1
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
114.3
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
112.4
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
112.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
111.6
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
110.3
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
104.0
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
100.8
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
100.2
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
100.2
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
92.4
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
91.8
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
91.6
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
89.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
85.1
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
74.6
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
58.7
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.