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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 1642.8
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1695.3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 3557.8
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 738.3
Min RPKM: 245.5
Std RPKM: 91.1
Median RPKM: 423.8
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
738.3
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
712.6
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
683.6
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
680.0
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
664.9
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
640.6
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
634.2
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
624.7
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
620.0
GTEX-1192X-2326-SM-5987X
50-59 years, male
614.8
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
612.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
606.8
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
600.5
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
595.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
595.1
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
592.7
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
586.1
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
585.8
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
583.4
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
581.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
580.2
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
570.7
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
568.7
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
567.6
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
561.6
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
560.0
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
552.3
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
550.1
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
543.3
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
541.8
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
536.2
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
535.4
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
533.1
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
532.4
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
525.3
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
525.3
GTEX-13113-1726-SM-5GCOO
60-69 years, female
522.0
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
518.7
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
518.3
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
517.9
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
512.6
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
510.9
GTEX-X261-0626-SM-3NMD9
50-59 years, male
509.8
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
509.1
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
506.6
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
505.4
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
502.6
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
501.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
500.6
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
500.1
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
496.8
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
495.5
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
490.1
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
487.2
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
486.8
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
486.1
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
486.1
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
486.0
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
485.2
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
482.6
GTEX-11P81-1926-SM-5BC53
30-39 years, female
479.6
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
478.5
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
478.2
GTEX-117YX-1426-SM-5H12H
50-59 years, male
477.6
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
477.5
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
476.2
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
475.3
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
472.6
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
468.9
GTEX-14753-2426-SM-5LU8U
60-69 years, male
468.6
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
468.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
466.2
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
465.7
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
465.2
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
464.3
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
461.2
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
458.7
GTEX-11P82-1326-SM-5HL62
20-29 years, male
458.6
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
455.6
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
454.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
453.9
GTEX-QEL4-2126-SM-447AE
50-59 years, male
452.1
GTEX-RU72-0626-SM-46MUI
50-59 years, female
448.9
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
448.4
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
447.3
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
445.5
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
444.9
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
444.8
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
442.9
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
442.5
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
441.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
440.9
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
440.7
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
440.6
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
438.9
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
437.7
GTEX-11EI6-0626-SM-5985T
60-69 years, male
436.6
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
431.7
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
431.2
GTEX-S341-1526-SM-4AD6K
40-49 years, female
429.6
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
427.8
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
426.6
GTEX-XBED-1626-SM-47JYN
60-69 years, male
426.6
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
426.3
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
424.4
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
424.1
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
423.8
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
423.8
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
421.9
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
421.0
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
420.3
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
420.2
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
420.1
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
418.0
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
413.7
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
413.6
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
413.4
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
412.3
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
412.1
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
412.0
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
411.9
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
411.4
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
411.2
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
411.0
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
411.0
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
410.4
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
408.8
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
407.2
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
406.4
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
405.3
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
405.3
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
405.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
404.6
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
404.6
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
403.7
GTEX-1122O-1226-SM-5H113
60-69 years, female
401.9
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
400.9
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
400.7
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
400.3
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
398.6
GTEX-QVJO-1826-SM-447C9
60-69 years, female
397.1
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
396.2
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
396.1
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
393.8
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
393.6
GTEX-WFON-1826-SM-3GILG
40-49 years, male
392.0
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
391.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
390.7
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
389.6
GTEX-REY6-2426-SM-48FF5
60-69 years, male
388.9
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
387.7
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
386.4
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
382.8
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
382.0
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
381.5
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
381.1
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
380.5
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
379.0
GTEX-144GM-0926-SM-5O994
20-29 years, male
378.6
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
376.3
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
373.2
GTEX-TML8-1226-SM-32QON
40-49 years, female
371.4
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
370.8
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
367.3
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
365.4
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
362.9
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
359.8
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
358.6
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
357.6
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
357.1
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
356.4
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
355.6
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
354.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
354.6
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
352.1
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
349.5
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
345.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
345.3
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
344.3
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
344.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
343.2
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
343.1
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
342.4
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
342.2
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
342.2
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
340.7
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
338.3
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
338.1
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
336.3
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
336.3
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
335.3
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
334.7
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
334.6
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
333.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
333.6
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
333.1
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
325.4
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
323.3
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
322.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
319.4
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
318.7
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
317.1
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
316.2
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
313.7
GTEX-T6MN-0726-SM-32PML
50-59 years, male
311.8
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
311.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
311.1
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
305.6
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
301.5
GTEX-R55D-0826-SM-48FEA
50-59 years, male
296.5
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
288.1
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
282.0
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
280.5
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
245.5
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.