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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 178.7
Min RPKM: 2.7
Std RPKM: 35.7
Median RPKM: 32.9
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
178.7
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
146.9
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
122.9
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
120.8
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
117.4
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
108.6
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
106.9
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
101.1
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
98.8
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
95.3
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
93.5
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
91.0
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
87.7
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
87.7
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
86.2
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
82.0
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
81.9
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
81.1
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
75.6
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
74.7
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
74.1
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
70.9
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
69.4
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
69.2
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
68.3
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
67.9
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
65.4
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
65.2
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
64.2
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
62.9
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
62.0
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
61.8
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
60.7
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
58.9
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
58.7
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
58.5
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
52.4
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
48.6
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
45.8
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
45.8
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
44.4
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
41.5
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
41.0
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
38.3
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
37.7
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
35.9
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
35.7
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
33.3
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
32.4
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
32.2
GTEX-QCQG-1226-SM-48U23
50-59 years, female
30.5
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
30.1
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
30.1
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
30.0
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
29.8
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
29.5
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
29.4
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
29.2
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
28.5
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
28.4
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
28.3
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
25.7
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
25.6
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
25.0
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
23.7
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
23.5
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
23.2
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
21.2
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
21.0
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
20.1
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
17.5
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
17.3
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
16.7
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
16.7
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
16.6
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
16.0
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
14.7
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
14.2
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
13.3
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
12.7
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
12.1
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
11.7
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
10.9
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
10.5
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
10.3
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
10.3
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
9.9
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
9.7
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
6.4
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
6.1
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
5.3
GTEX-11I78-2026-SM-5987C
50-59 years, female
5.0
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
4.6
GTEX-S341-1226-SM-4AD5S
40-49 years, female
3.5
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
3.3
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
2.7
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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