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COLON - Expression summary
RNA expressioni
HPA:1.0TPM
GTEx:1.2RPKM
FANTOM5:9.6Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 1.0
overview Male, age 54 Sample 1
TPM: 1.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 1.2
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 1.9
Samples: 149

Max RPKM: 4.1
Min RPKM: 0.4
Std RPKM: 0.7
Median RPKM: 1.9
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 4.1
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 3.6
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 3.5
GTEX-12WSD-2626-SM-5EGJE 60-69 years, female 3.3
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 3.3
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 3.3
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 3.3
GTEX-13FH7-1626-SM-5J2O9 50-59 years, female 3.2
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 3.0
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 2.9
Show all
Colon - Transverse
RPKM: 0.7
Samples: 196

Max RPKM: 3.9
Min RPKM: 0.0
Std RPKM: 0.7
Median RPKM: 0.5
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 3.9
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 3.1
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 3.0
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 2.9
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 2.8
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 2.7
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 2.7
GTEX-11ONC-2026-SM-5HL61 60-69 years, male 2.4
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 2.2
GTEX-RU1J-1326-SM-46MUL 20-29 years, female 2.2
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 9.6
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 11.3
FF:10014-101C5 62,83,84 years, mixed 9.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.