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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 89.3
Min RPKM: 25.7
Std RPKM: 10.5
Median RPKM: 43.1
GTEX-ZAJG-2926-SM-5HL8P
50-59 years, female
89.3
GTEX-11EMC-1926-SM-5A5JU
60-69 years, female
72.3
GTEX-PWOO-2026-SM-48TDE
40-49 years, female
67.6
GTEX-13D11-1326-SM-5IJFY
50-59 years, female
65.7
GTEX-OHPK-2526-SM-3MJH9
50-59 years, female
62.5
GTEX-X8HC-2826-SM-46MWJ
50-59 years, female
61.7
GTEX-S7SF-1426-SM-4AT5A
20-29 years, female
59.2
GTEX-12WSB-2426-SM-5EGJC
60-69 years, female
58.7
GTEX-146FH-2626-SM-5Q5E1
50-59 years, female
56.9
GTEX-QCQG-1226-SM-48U23
50-59 years, female
56.5
GTEX-ZLWG-1126-SM-4WWFQ
50-59 years, female
56.2
GTEX-N7MT-1926-SM-3LK5N
60-69 years, female
55.7
GTEX-SE5C-1126-SM-4BRWZ
40-49 years, female
53.7
GTEX-13QIC-1826-SM-5J1MY
60-69 years, female
53.3
GTEX-Y114-1926-SM-4TT8J
50-59 years, female
52.5
GTEX-QVJO-2526-SM-4R1KB
60-69 years, female
52.1
GTEX-PWCY-1726-SM-48TD3
20-29 years, female
51.0
GTEX-ZZPU-2226-SM-5EGIV
50-59 years, female
51.0
GTEX-14A5I-2726-SM-5SIB3
50-59 years, female
50.7
GTEX-QDT8-2526-SM-48TYX
30-39 years, female
50.6
GTEX-NL3G-2526-SM-4SOIE
60-69 years, female
50.0
GTEX-11DXX-1726-SM-5H11T
60-69 years, female
49.9
GTEX-ZP4G-0826-SM-4WWF3
20-29 years, female
49.6
GTEX-OHPL-2526-SM-3MJGT
60-69 years, female
49.4
GTEX-ZTPG-2226-SM-57WF9
20-29 years, female
49.4
GTEX-11TTK-2726-SM-5GU58
60-69 years, female
49.1
GTEX-13QBU-1726-SM-5IJFQ
40-49 years, female
48.8
GTEX-ZE7O-2426-SM-57WD7
50-59 years, female
48.0
GTEX-TMMY-1926-SM-4DXUU
40-49 years, female
47.5
GTEX-ZYY3-2626-SM-5N9DH
60-69 years, female
47.4
GTEX-S341-1226-SM-4AD5S
40-49 years, female
47.3
GTEX-ZQG8-1126-SM-51MRL
60-69 years, female
46.9
GTEX-1117F-2526-SM-5GZY6
60-69 years, female
46.8
GTEX-1399U-1526-SM-5J2N7
50-59 years, female
46.8
GTEX-ZV6S-1326-SM-59HJA
40-49 years, female
46.8
GTEX-146FR-2426-SM-5NQAU
60-69 years, female
46.6
GTEX-131XG-2126-SM-5DUXG
50-59 years, female
46.3
GTEX-RU1J-1426-SM-46MUV
20-29 years, female
45.8
GTEX-11VI4-0726-SM-5GU5B
40-49 years, female
45.6
GTEX-XUW1-0326-SM-4BOOR
50-59 years, female
45.6
GTEX-12WSD-2926-SM-5LZUH
60-69 years, female
45.4
GTEX-XUJ4-1626-SM-4BONV
60-69 years, female
45.2
GTEX-Q734-1426-SM-48TZQ
40-49 years, female
45.0
GTEX-YJ8O-1226-SM-5P9JE
40-49 years, female
44.6
GTEX-X15G-1926-SM-4PQZQ
50-59 years, female
44.2
GTEX-RWS6-1726-SM-47JXP
60-69 years, female
43.8
GTEX-11I78-2026-SM-5987C
50-59 years, female
43.2
GTEX-11XUK-1326-SM-5EQM4
40-49 years, female
43.2
GTEX-12ZZX-1926-SM-5EGKC
40-49 years, female
43.0
GTEX-XV7Q-1626-SM-4BRWC
40-49 years, female
43.0
GTEX-Y8LW-1426-SM-5RQJJ
50-59 years, female
42.9
GTEX-147F3-1526-SM-5SIAK
50-59 years, female
42.7
GTEX-ZVT2-0626-SM-5GICR
50-59 years, female
42.6
GTEX-1399S-2326-SM-5K7YV
30-39 years, female
42.4
GTEX-ZGAY-2226-SM-4YCCX
40-49 years, female
42.0
GTEX-11P81-2126-SM-5HL6N
30-39 years, female
41.3
GTEX-PX3G-2526-SM-48TZV
20-29 years, female
40.9
GTEX-U3ZN-0926-SM-4DXTU
30-39 years, female
40.9
GTEX-ZYWO-2026-SM-5GIDA
40-49 years, female
40.2
GTEX-Y3IK-2226-SM-4YCD4
50-59 years, female
39.0
GTEX-13PL7-2726-SM-5L3GB
60-69 years, female
38.8
GTEX-13OVI-0926-SM-5J1MI
60-69 years, female
38.3
GTEX-132AR-1626-SM-5EGHP
50-59 years, female
38.2
GTEX-145ME-1426-SM-5RQJS
40-49 years, female
38.1
GTEX-113JC-1926-SM-5N9GE
50-59 years, female
38.0
GTEX-P78B-2226-SM-3P5ZZ
40-49 years, female
37.7
GTEX-TSE9-2526-SM-4DXUS
60-69 years, female
37.7
GTEX-11EM3-1826-SM-5A5KO
20-29 years, female
36.7
GTEX-14BMU-1926-SM-5S2QC
20-29 years, female
36.6
GTEX-UJHI-1326-SM-4IHJO
50-59 years, female
36.3
GTEX-S4P3-1126-SM-4AD52
50-59 years, female
36.1
GTEX-T6MO-1226-SM-4DM5S
40-49 years, female
36.1
GTEX-T2IS-1926-SM-4DM74
20-29 years, female
35.8
GTEX-WEY5-0826-SM-4LMIH
40-49 years, female
35.5
GTEX-13N11-1526-SM-5L3FL
50-59 years, female
34.9
GTEX-13PVR-1426-SM-5S2PW
60-69 years, female
34.9
GTEX-S4UY-1326-SM-4AD4X
40-49 years, female
34.4
GTEX-PWN1-2526-SM-48TDS
40-49 years, female
34.2
GTEX-PLZ4-2726-SM-3P61A
50-59 years, female
33.9
GTEX-ZYVF-0326-SM-5GIES
50-59 years, female
33.7
GTEX-13U4I-2026-SM-5LU3L
40-49 years, female
33.5
GTEX-ZXES-0626-SM-5E45P
30-39 years, female
33.1
GTEX-11GSP-2226-SM-5HL5Q
60-69 years, female
33.0
GTEX-131YS-2426-SM-5J2OD
60-69 years, female
32.1
GTEX-ZC5H-2226-SM-4WAWS
40-49 years, female
31.9
GTEX-WRHU-2926-SM-4MVNQ
50-59 years, female
31.6
GTEX-TML8-1126-SM-4DXSS
40-49 years, female
31.5
GTEX-W5WG-1026-SM-4LMIF
50-59 years, female
31.5
GTEX-13W3W-2326-SM-5LU4Y
60-69 years, female
31.4
GTEX-12WSJ-1326-SM-5GCOB
40-49 years, female
31.2
GTEX-YFC4-2926-SM-5IFJ8
40-49 years, female
30.5
GTEX-UPIC-1426-SM-4IHLQ
20-29 years, female
30.2
GTEX-ZVT3-2726-SM-5GU5X
60-69 years, female
29.3
GTEX-14AS3-1726-SM-5RQJV
40-49 years, female
28.7
GTEX-14DAQ-2326-SM-5S2QX
60-69 years, female
26.4
GTEX-P4PP-2526-SM-3P61P
30-39 years, female
25.7
Show all
VAGINA - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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