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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Hepatocytes: 80 Fibroblasts: 15 Other cell types: 5
Male, age 74
Sample 3 TPM: 153.6
Cell types%
Hepatocytes: 85 Fibroblasts: 5 Other cell types: 10
Female, age 62
Sample 4 TPM: 82.7
Cell types%
Hepatocytes: 70 Fibroblasts: 10 Other cell types: 20
Male, age 78
Sample 5 TPM: 49.8
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Male, age 53
Sample 6 TPM: 78.3
Cell types%
Hepatocytes: 80 Fibroblasts: 5 Other cell types: 15
Male, age 77
Sample 7 TPM: 77
Cell types%
Hepatocytes: 75 Fibroblasts: 5 Other cell types: 20
Female, age 72
Sample 8 TPM: 93.4
Cell types%
Hepatocytes: 50 Fibroblasts: 10 Other cell types: 40
Male, age 70
Sample 9 TPM: 79.3
Cell types%
Hepatocytes: 65 Fibroblasts: 10 Other cell types: 25
Female, age 23
Sample 10 TPM: 122.5
Cell types%
Hepatocytes: 70 Fibroblasts: 5 Other cell types: 25
LIVER - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 182.1
Min RPKM: 24.2
Std RPKM: 27.5
Median RPKM: 76.1
GTEX-UTHO-2426-SM-4JBHD
60-69 years, male
182.1
GTEX-S32W-1926-SM-4AD63
50-59 years, female
175.3
GTEX-ZTPG-1426-SM-51MT3
20-29 years, female
173.8
GTEX-ZYY3-0626-SM-5NQ6W
60-69 years, female
156.8
GTEX-131XE-0326-SM-5LZVO
50-59 years, male
152.2
GTEX-14C38-1526-SM-5RQJ7
50-59 years, male
147.6
GTEX-139YR-0226-SM-5IFEM
50-59 years, male
139.8
GTEX-X4XY-1626-SM-46MVN
60-69 years, male
137.4
GTEX-QDVN-0826-SM-48TZ2
50-59 years, male
135.7
GTEX-12WSG-0626-SM-5FQTQ
50-59 years, female
131.4
GTEX-12KS4-1326-SM-5LUB3
30-39 years, male
130.4
GTEX-146FH-1526-SM-5NQBU
50-59 years, female
119.8
GTEX-Q734-0326-SM-48U15
40-49 years, female
113.8
GTEX-1497J-0726-SM-5Q5D1
60-69 years, male
112.8
GTEX-YB5E-0326-SM-5IFHU
40-49 years, male
110.9
GTEX-QEG4-1826-SM-4R1JN
30-39 years, male
110.4
GTEX-QESD-2026-SM-447BI
20-29 years, male
110.0
GTEX-S33H-1626-SM-4AD68
30-39 years, male
109.1
GTEX-RWSA-1426-SM-47JXA
40-49 years, male
106.9
GTEX-ZVT4-0626-SM-5E45T
50-59 years, female
106.7
GTEX-UPIC-0926-SM-4IHLV
20-29 years, female
105.6
GTEX-13N11-0926-SM-5IJG2
50-59 years, female
103.9
GTEX-YFC4-1526-SM-5IFJS
40-49 years, female
103.7
GTEX-QEL4-1226-SM-447A4
50-59 years, male
102.7
GTEX-13NZ9-1326-SM-5MR3V
50-59 years, male
100.6
GTEX-RTLS-1326-SM-46MUN
60-69 years, female
99.9
GTEX-Y5LM-0426-SM-4VBRO
40-49 years, female
99.9
GTEX-13113-1326-SM-5GCOI
60-69 years, female
98.5
GTEX-13O3O-1826-SM-5IFGW
60-69 years, female
98.0
GTEX-144GM-1326-SM-5LU5E
20-29 years, male
97.0
GTEX-145MF-0826-SM-5QGQA
50-59 years, male
96.6
GTEX-REY6-1226-SM-48FDR
60-69 years, male
95.1
GTEX-147F4-1426-SM-5LUA8
50-59 years, male
94.0
GTEX-RM2N-1926-SM-48FCU
50-59 years, male
93.7
GTEX-145MO-2326-SM-5NQ9K
60-69 years, male
93.3
GTEX-ZAB4-0826-SM-5LU9D
40-49 years, male
92.9
GTEX-WYVS-1926-SM-4PQZ2
40-49 years, female
92.4
GTEX-RU72-1426-SM-46MUF
50-59 years, female
90.0
GTEX-ZF29-2026-SM-4WWB7
60-69 years, female
89.2
GTEX-TKQ2-1726-SM-4DXUP
50-59 years, male
89.1
GTEX-139TS-1426-SM-5IFJD
60-69 years, male
87.4
GTEX-13NYB-1026-SM-5IFH3
40-49 years, male
86.5
GTEX-12WSI-0226-SM-5GCNA
50-59 years, male
85.8
GTEX-ZPU1-0826-SM-57WG2
40-49 years, male
85.6
GTEX-S4Z8-0526-SM-4AD4T
60-69 years, male
84.4
GTEX-XOTO-0826-SM-4B65O
50-59 years, male
83.9
GTEX-WQUQ-1926-SM-4OOSA
60-69 years, male
83.7
GTEX-X4EO-1126-SM-4QARQ
60-69 years, female
82.6
GTEX-P78B-1326-SM-3P611
40-49 years, female
81.9
GTEX-1399T-0826-SM-5IFES
60-69 years, male
81.4
GTEX-13FTW-1126-SM-5J2NV
40-49 years, male
80.9
GTEX-R53T-0326-SM-48FEC
50-59 years, female
80.8
GTEX-PX3G-0826-SM-48TZS
20-29 years, female
78.8
GTEX-11EQ9-0526-SM-5A5JZ
30-39 years, male
78.2
GTEX-132NY-0926-SM-5P9G3
60-69 years, male
77.9
GTEX-YEC4-0826-SM-5P9FV
40-49 years, male
76.5
GTEX-RN64-1826-SM-48FDV
50-59 years, male
76.4
GTEX-11WQC-0726-SM-5EQMR
60-69 years, male
76.3
GTEX-13PVR-0126-SM-5S2PY
60-69 years, female
76.2
GTEX-T6MN-1226-SM-3NMA5
50-59 years, male
76.1
GTEX-11DXY-0526-SM-5EGGQ
60-69 years, male
75.4
GTEX-YECK-1926-SM-4W21H
60-69 years, male
75.4
GTEX-UPK5-1426-SM-4JBHH
40-49 years, male
74.8
GTEX-ZVP2-0626-SM-51MSO
50-59 years, male
74.7
GTEX-1269C-0626-SM-5FQSS
60-69 years, female
74.3
GTEX-13FLV-0326-SM-5N9DJ
50-59 years, male
74.2
GTEX-13OW6-2626-SM-5IFF2
50-59 years, male
74.2
GTEX-X4EP-1026-SM-4QAS5
60-69 years, female
73.0
GTEX-14A5I-1726-SM-5QGQ5
50-59 years, female
72.1
GTEX-ZZPU-0426-SM-5GZYH
50-59 years, female
72.1
GTEX-147JS-1126-SM-5RQIW
60-69 years, male
71.9
GTEX-12WSL-0226-SM-5CVMJ
50-59 years, male
71.7
GTEX-11ZVC-0726-SM-5FQT9
50-59 years, female
71.2
GTEX-14AS3-0126-SM-5Q5F4
40-49 years, female
71.0
GTEX-14DAQ-1726-SM-5S2R2
60-69 years, female
70.5
GTEX-ZYT6-0626-SM-5E45V
30-39 years, male
70.5
GTEX-VUSG-0126-SM-4KL1X
50-59 years, male
70.4
GTEX-QV44-0326-SM-4R1KD
50-59 years, male
70.3
GTEX-12WSM-0726-SM-5GCOW
60-69 years, male
69.0
GTEX-X261-1726-SM-4PQYT
50-59 years, male
68.7
GTEX-11OF3-0726-SM-5BC4Z
60-69 years, male
68.1
GTEX-SJXC-1226-SM-4DM78
60-69 years, male
67.8
GTEX-1212Z-0226-SM-59HLF
60-69 years, male
67.5
GTEX-14E1K-0326-SM-5S2PE
50-59 years, male
67.5
GTEX-13SLX-1226-SM-5S2Q6
50-59 years, female
66.9
GTEX-131YS-1626-SM-5HL6C
60-69 years, female
66.8
GTEX-WFON-1726-SM-4LVMQ
40-49 years, male
66.6
GTEX-11NV4-1326-SM-5HL6V
60-69 years, male
66.3
GTEX-13VXU-0926-SM-5IFFH
50-59 years, male
66.3
GTEX-13FTZ-0726-SM-5IFFY
60-69 years, male
65.5
GTEX-Z9EW-0426-SM-5CVM9
40-49 years, male
65.3
GTEX-ZAB5-0426-SM-5CVMI
50-59 years, male
64.5
GTEX-1399R-1226-SM-5P9GF
30-39 years, male
63.5
GTEX-U3ZN-0226-SM-3DB8D
30-39 years, female
63.5
GTEX-12WSD-1426-SM-5GCN9
60-69 years, female
63.3
GTEX-13N2G-0926-SM-5IFGJ
60-69 years, male
63.1
GTEX-XBEC-1526-SM-4AT68
50-59 years, male
62.3
GTEX-11ZTS-1426-SM-5EQMM
60-69 years, female
61.9
GTEX-ZVT3-1626-SM-5GU66
60-69 years, female
61.8
GTEX-11ZUS-2526-SM-59872
30-39 years, male
61.5
GTEX-OOBJ-0826-SM-3NB2K
60-69 years, male
61.5
GTEX-RNOR-1426-SM-48FDJ
50-59 years, female
61.5
GTEX-14753-1626-SM-5NQ9L
60-69 years, male
61.2
GTEX-Q2AG-1126-SM-48U1P
40-49 years, female
61.1
GTEX-139TU-0826-SM-5IJFG
60-69 years, male
61.0
GTEX-11DXZ-0126-SM-5EGGY
50-59 years, male
60.4
GTEX-13QJC-0726-SM-5RQJK
60-69 years, female
60.2
GTEX-ZF2S-3026-SM-4WWCH
50-59 years, female
59.4
GTEX-13112-1426-SM-5EGH8
50-59 years, male
58.9
GTEX-12696-0826-SM-5EGGE
60-69 years, male
57.5
GTEX-Y5V5-0926-SM-4VBPZ
60-69 years, female
57.5
GTEX-13NZB-0626-SM-5IFH6
30-39 years, male
56.8
GTEX-WZTO-0626-SM-4PQYY
40-49 years, male
55.8
GTEX-131XH-0626-SM-5LZWH
50-59 years, male
55.3
GTEX-11GSP-0626-SM-5986T
60-69 years, female
54.4
GTEX-11NUK-1226-SM-5P9GM
50-59 years, male
53.2
GTEX-X3Y1-2726-SM-4PQZH
40-49 years, male
52.4
GTEX-145LU-1326-SM-5LU9N
50-59 years, male
48.6
GTEX-12ZZZ-1326-SM-59HKW
60-69 years, male
24.2
Show all
LIVER - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Female, age 60
