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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 570.4
Min RPKM: 22.8
Std RPKM: 100.6
Median RPKM: 108.8
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
570.4
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
443.9
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
439.9
GTEX-12WSB-0011-R1b-SM-5P9EY
60-69 years, female
367.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
348.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
317.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
312.3
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
312.2
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
311.2
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
289.0
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
283.4
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
250.5
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
238.6
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
238.3
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
232.3
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
231.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
229.3
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
222.8
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
216.7
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
205.1
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
204.9
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
203.8
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
202.8
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
200.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
192.1
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
189.0
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
177.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
172.4
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
168.2
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
162.2
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
159.7
GTEX-XOTO-0011-R1B-SM-4B65C
50-59 years, male
158.5
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
156.5
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
152.2
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
151.9
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
151.4
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
149.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
143.5
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
139.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
138.6
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
136.7
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
133.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
121.4
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
119.2
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
118.0
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
117.4
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
109.2
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
108.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
107.1
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
105.7
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
102.6
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
102.3
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
99.6
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
99.4
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
98.2
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
96.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
95.6
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
89.2
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
89.1
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
85.8
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
83.3
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
82.7
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
81.3
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
81.2
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
81.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
79.6
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
78.9
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
78.5
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
78.0
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
77.9
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
77.6
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
77.2
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
76.8
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
76.8
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
72.4
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
70.4
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
69.5
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
68.2
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
67.7
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
67.3
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
66.6
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
65.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
63.7
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
61.1
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
55.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
54.7
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
50.4
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
43.9
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
41.8
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
40.5
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
39.7
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
30.4
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
25.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
22.8
Show all
HIPPOCAMPUS - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.