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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Glandular cells: 15 Adipocytes: 5 Other cell types: 80
Female, age 80
Sample 2 TPM: 50.1
Cell types%
Glandular cells: 5 Adipocytes: 15 Other cell types: 80
Female, age 47
Sample 3 TPM: 1.3
Cell types%
Glandular cells: 5 Adipocytes: 5 Other cell types: 90
Female, age 38
Sample 4 TPM: 0.6
Cell types%
Glandular cells: 40 Adipocytes: 5 Other cell types: 55
BREAST - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 391.6
Min RPKM: 0.8
Std RPKM: 72.7
Median RPKM: 24.4
GTEX-11ZTT-2326-SM-5EQLG
60-69 years, female
391.6
GTEX-ZQUD-1926-SM-51MSA
30-39 years, male
355.5
GTEX-YEC3-1026-SM-5IFI5
50-59 years, male
295.5
GTEX-ZT9W-2026-SM-51MRA
50-59 years, male
292.4
GTEX-ZDYS-1126-SM-5K7UB
50-59 years, male
286.8
GTEX-TKQ1-0226-SM-33HB5
30-39 years, male
277.2
GTEX-ZPIC-1126-SM-5BC7F
40-49 years, female
261.5
GTEX-Y5V6-2126-SM-4WWFX
60-69 years, male
244.2
GTEX-REY6-2426-SM-48FF5
60-69 years, male
243.8
GTEX-R55D-0826-SM-48FEA
50-59 years, male
239.1
GTEX-XGQ4-0926-SM-4AT4U
50-59 years, male
236.6
GTEX-YB5K-1626-SM-5IFIN
40-49 years, female
230.8
GTEX-13FTW-1426-SM-5LZWZ
40-49 years, male
204.9
GTEX-145ME-1526-SM-5Q5F2
40-49 years, female
202.3
GTEX-139T6-1626-SM-5PNYZ
50-59 years, male
190.7
GTEX-ZZ64-1226-SM-5E43R
20-29 years, male
182.9
GTEX-11TUW-1826-SM-5BC5D
60-69 years, male
182.4
GTEX-ZQG8-0726-SM-5P9H9
60-69 years, female
178.8
GTEX-XMK1-1126-SM-4IHJ8
40-49 years, male
174.4
GTEX-11P82-1326-SM-5HL62
20-29 years, male
167.3
GTEX-14E6E-1326-SM-5S2NR
30-39 years, male
150.0
GTEX-S32W-2026-SM-4AD6E
50-59 years, female
147.6
GTEX-Y9LG-1426-SM-5IFJZ
30-39 years, male
147.0
GTEX-13FTX-1126-SM-5N9EN
20-29 years, female
144.9
GTEX-YB5E-1726-SM-5IFJ3
40-49 years, male
143.0
GTEX-RUSQ-2026-SM-4GIAK
50-59 years, male
142.6
GTEX-T6MO-0326-SM-32QOK
40-49 years, female
126.4
GTEX-13CF3-2126-SM-5IFJP
60-69 years, female
125.9
GTEX-1211K-1926-SM-5EQLB
60-69 years, female
120.8
GTEX-12WSM-1726-SM-5BC6J
60-69 years, male
119.6
GTEX-XQ8I-2426-SM-4WAXY
50-59 years, male
118.7
GTEX-12BJ1-1826-SM-5HL9N
60-69 years, male
117.9
GTEX-YFCO-1826-SM-4W1YH
40-49 years, male
113.1
GTEX-X4XY-0926-SM-4E3JD
60-69 years, male
113.0
GTEX-U8XE-0826-SM-4E3J1
30-39 years, male
110.0
GTEX-11I78-2226-SM-5PNYA
50-59 years, female
108.1
GTEX-ZDTT-2126-SM-5S2OJ
60-69 years, male
107.7
GTEX-145MN-1926-SM-5SIAI
30-39 years, male
105.8
GTEX-12WSN-1326-SM-5GCNT
40-49 years, male
100.5
GTEX-11ZUS-0826-SM-5FQUY
30-39 years, male
99.7
GTEX-S4UY-0726-SM-4AD6X
40-49 years, female
97.8
GTEX-SE5C-2126-SM-4BRUJ
40-49 years, female
97.4
GTEX-PSDG-1626-SM-48TCQ
50-59 years, male
91.7
GTEX-13N1W-0626-SM-5MR4U
70-79 years, male
88.6
GTEX-144GL-2026-SM-5LU3O
50-59 years, male
88.4
GTEX-117YX-1426-SM-5H12H
50-59 years, male
85.6
GTEX-Y3I4-1526-SM-4TT7K
50-59 years, male
82.0
GTEX-ZA64-1526-SM-5CVMD
20-29 years, male
80.9
GTEX-Y8LW-1626-SM-5IFHX
50-59 years, female
79.8
GTEX-ZV6S-1826-SM-5NQ8D
40-49 years, female
78.9
GTEX-13O61-1826-SM-5KM4I
60-69 years, male
77.6
GTEX-117XS-1926-SM-5GICO
60-69 years, male
74.4
GTEX-S4Q7-1126-SM-4AD6R
20-29 years, male
72.4
GTEX-11EQ9-1826-SM-5Q5AJ
30-39 years, male
71.4
GTEX-XUW1-2326-SM-4BOO5
50-59 years, female
70.9
GTEX-ZYFC-0826-SM-5E44K
50-59 years, male
67.2
GTEX-145MO-0826-SM-5NQBL
60-69 years, male
66.8
GTEX-133LE-1726-SM-5K7VQ
20-29 years, female
65.2
GTEX-Y114-2026-SM-4TT7L
50-59 years, female
61.1
GTEX-ZUA1-1526-SM-59HLS
40-49 years, male
60.3
GTEX-ZLFU-2126-SM-4WWEV
40-49 years, male
60.0
GTEX-WFON-1826-SM-3GILG
40-49 years, male
58.7
GTEX-11LCK-2426-SM-5HL5F
30-39 years, male
57.4
GTEX-132NY-0826-SM-5K7Y7
60-69 years, male
55.7
GTEX-Y8E4-1626-SM-5S2MW
40-49 years, male
55.7
GTEX-WY7C-2726-SM-3NB3P
50-59 years, male
55.6
GTEX-XYKS-1326-SM-4BRUN
60-69 years, female
54.7
GTEX-11DXZ-1926-SM-5GZZL
50-59 years, male
53.3
GTEX-RWS6-1926-SM-47JXY
60-69 years, female
53.1
GTEX-ZLV1-1426-SM-4WWES
60-69 years, female
52.9
GTEX-144GM-0926-SM-5O994
20-29 years, male
50.7
GTEX-139TU-0626-SM-5KM3X
60-69 years, male
50.3
GTEX-YJ8O-2226-SM-5IFHW
40-49 years, female
48.8
GTEX-13PVQ-1026-SM-5KM3M
50-59 years, male
46.9
GTEX-11NSD-0926-SM-5N9DR
20-29 years, male
46.1
GTEX-QMRM-1626-SM-4R1KV
50-59 years, male
45.2
GTEX-WXYG-2226-SM-4E3IM
50-59 years, female
44.1
GTEX-11O72-2126-SM-5N9FO
40-49 years, male
43.7
GTEX-11NV4-2026-SM-5N9DG
60-69 years, male
43.2
GTEX-13FHO-0826-SM-5L3E8
60-69 years, male
43.0
GTEX-11TT1-2126-SM-5GU5Y
20-29 years, male
42.6
GTEX-ZDXO-0126-SM-5S2ND
60-69 years, male
42.2
GTEX-XQ3S-1326-SM-4BOPQ
20-29 years, male
41.5
GTEX-13OW8-0226-SM-5K7UP
60-69 years, male
41.4
GTEX-ZV7C-1826-SM-5NQ83
50-59 years, male
41.1
GTEX-11ONC-2126-SM-5HL6E
60-69 years, male
39.6
GTEX-ZYWO-2326-SM-5GZY4
40-49 years, female
38.0
GTEX-11GSO-1926-SM-5A5K3
60-69 years, male
37.9
GTEX-1122O-1226-SM-5H113
60-69 years, female
37.8
GTEX-ZYT6-0126-SM-5E45J
30-39 years, male
37.7
GTEX-12KS4-0126-SM-5Q5A5
30-39 years, male
37.0
GTEX-12WSK-2226-SM-5GCO5
40-49 years, female
36.9
GTEX-13O3Q-2226-SM-5KM4O
50-59 years, male
34.9
GTEX-1399U-1826-SM-5PNZ1
50-59 years, female
34.6
GTEX-WRHU-0326-SM-3MJFY
50-59 years, female
34.0
GTEX-11WQK-2426-SM-5GU5C
50-59 years, male
33.5
GTEX-11OF3-1926-SM-59889
60-69 years, male
33.1
GTEX-ZVT4-1026-SM-57WC4
50-59 years, female
30.0
GTEX-13W3W-1226-SM-5LU4H
60-69 years, female
29.1
GTEX-TKQ2-1826-SM-33HB2
50-59 years, male
28.3
GTEX-TML8-1226-SM-32QON
40-49 years, female
28.2
GTEX-Y111-2026-SM-4SOJA
50-59 years, male
27.7
GTEX-T5JW-2026-SM-4DM63
20-29 years, female
27.3
GTEX-Y5V5-2126-SM-4WWFO
60-69 years, female
26.3
GTEX-ZAB4-2526-SM-5HL8M
40-49 years, male
25.4
GTEX-S7SE-0826-SM-4AT4D
50-59 years, male
24.7
GTEX-ZY6K-1626-SM-5GZWV
50-59 years, male
24.7
GTEX-XUJ4-1926-SM-4BOOV
60-69 years, female
24.0
GTEX-14753-2426-SM-5LU8U
60-69 years, male
23.5
GTEX-146FH-0826-SM-5SI8T
50-59 years, female
22.0
GTEX-WI4N-1426-SM-3LK7H
40-49 years, female
21.8
GTEX-1313W-0826-SM-5EQ4T
50-59 years, female
21.7
GTEX-13CF2-2026-SM-5K7VI
60-69 years, male
21.1
GTEX-XBED-1626-SM-47JYN
60-69 years, male
20.7
GTEX-ZVZQ-0826-SM-51MRF
60-69 years, female
20.2
GTEX-QVJO-1826-SM-447C9
60-69 years, female
19.3
GTEX-U412-1826-SM-4DXTJ
60-69 years, male
19.0
GTEX-X261-0626-SM-3NMD9
50-59 years, male
18.9
GTEX-14AS3-1626-SM-5S2OY
40-49 years, female
18.4
GTEX-13S86-1226-SM-5S2OA
40-49 years, male
17.8
GTEX-XV7Q-2326-SM-4BRVZ
40-49 years, female
17.7
GTEX-147F4-2826-SM-5NQBN
50-59 years, male
17.5
GTEX-1269C-2426-SM-5FQSN
60-69 years, female
17.1
GTEX-13D11-1026-SM-5IJFB
50-59 years, female
16.9
GTEX-UTHO-1026-SM-3GAF7
60-69 years, male
16.8
GTEX-S33H-0326-SM-4AD6N
30-39 years, male
16.6
GTEX-T6MN-0726-SM-32PML
50-59 years, male
15.8
GTEX-QEL4-2126-SM-447AE
50-59 years, male
15.6
GTEX-13OW5-2226-SM-5L3HC
60-69 years, male
15.2
GTEX-11GS4-2126-SM-5A5KR
60-69 years, male
15.1
GTEX-ZZPU-0626-SM-5E43T
50-59 years, female
13.4
GTEX-ZVTK-0326-SM-51MRR
20-29 years, male
13.1
GTEX-ZF29-1926-SM-5S2P1
60-69 years, female
12.4
GTEX-13113-1726-SM-5GCOO
60-69 years, female
12.1
GTEX-Y3IK-2326-SM-4WWDT
50-59 years, female
12.1
GTEX-ZEX8-2226-SM-57WC6
50-59 years, male
11.9
GTEX-R53T-1526-SM-48FEK
50-59 years, female
11.3
GTEX-11P81-1926-SM-5BC53
30-39 years, female
11.1
GTEX-111YS-1926-SM-5GICC
60-69 years, male
10.6
GTEX-WYJK-1326-SM-3NB2T
50-59 years, male
10.5
GTEX-S4P3-1326-SM-4AD6V
50-59 years, female
10.1
GTEX-11DXY-2326-SM-5GICW
60-69 years, male
9.6
GTEX-12WSB-0626-SM-59HJO
60-69 years, female
9.5
GTEX-145LT-0726-SM-5S2VM
40-49 years, male
9.5
GTEX-11WQC-1726-SM-5GU4W
60-69 years, male
9.2
GTEX-13W46-0826-SM-5LU3H
50-59 years, male
8.9
GTEX-W5X1-2326-SM-3GIL6
40-49 years, female
8.9
GTEX-ZVT2-1826-SM-5NQ8W
50-59 years, female
8.3
GTEX-ZYW4-0826-SM-5GIDG
60-69 years, male
8.2
GTEX-RU72-0626-SM-46MUI
50-59 years, female
8.1
GTEX-11P7K-0726-SM-5EGKX
30-39 years, male
8.0
GTEX-ZTTD-1026-SM-51MRD
50-59 years, male
7.9
GTEX-11DXW-0626-SM-5N9ER
40-49 years, male
7.5
GTEX-11EI6-0626-SM-5985T
60-69 years, male
7.5
GTEX-ZU9S-1926-SM-5NQBP
30-39 years, male
7.5
GTEX-13QIC-2326-SM-5LU5N
60-69 years, female
7.4
GTEX-X15G-1626-SM-3NMB3
50-59 years, female
7.3
GTEX-13N11-1726-SM-5J1OJ
50-59 years, female
7.2
GTEX-Q2AG-0326-SM-48U1O
40-49 years, female
7.1
GTEX-132AR-0826-SM-5EGK6
50-59 years, female
6.9
GTEX-11DZ1-0326-SM-5N9BN
50-59 years, male
6.3
GTEX-13O3O-0826-SM-5K7WE
60-69 years, female
5.8
GTEX-12ZZX-1126-SM-5EGKB
40-49 years, female
5.7
GTEX-U3ZN-1926-SM-4DXSG
30-39 years, female
5.6
GTEX-14ABY-2126-SM-5QGQZ
50-59 years, male
5.5
GTEX-WOFL-0826-SM-3MJG1
60-69 years, male
5.4
GTEX-Y5LM-1726-SM-4VDSX
40-49 years, female
5.4
GTEX-UJHI-1426-SM-3DB9C
50-59 years, female
5.2
GTEX-ZF3C-2326-SM-5S2MZ
50-59 years, female
5.2
GTEX-XOT4-0726-SM-4GIAW
60-69 years, female
5.1
GTEX-TMMY-0726-SM-33HBE
40-49 years, female
4.9
GTEX-ZWKS-2826-SM-5NQ74
30-39 years, male
4.9
GTEX-UPK5-2326-SM-3P5Z8
40-49 years, male
4.7
GTEX-1314G-1226-SM-5BC6D
30-39 years, male
4.5
GTEX-U3ZH-1426-SM-4DXSR
30-39 years, male
4.5
GTEX-13NZ8-0126-SM-5IJCT
60-69 years, female
4.2
GTEX-11PRG-0826-SM-5EQ6A
50-59 years, male
4.0
GTEX-ZTX8-1226-SM-4YCE9
20-29 years, male
3.8
GTEX-ZVE2-1226-SM-5NQ8R
50-59 years, male
3.7
GTEX-QEG5-0726-SM-4R1JQ
20-29 years, male
3.6
GTEX-VUSG-2226-SM-4KKZO
50-59 years, male
3.6
GTEX-ZAJG-0626-SM-5HL8X
50-59 years, female
3.5
GTEX-1117F-2826-SM-5GZXL
60-69 years, female
3.2
GTEX-T2YK-2226-SM-32QPT
50-59 years, male
3.0
GTEX-T5JC-2126-SM-32PMO
20-29 years, male
3.0
GTEX-R55F-1726-SM-2TF4R
50-59 years, male
2.9
GTEX-ZXES-0826-SM-5E43C
30-39 years, female
2.9
GTEX-QDT8-0626-SM-48TYW
30-39 years, female
2.7
GTEX-XMD2-0926-SM-4WWEF
60-69 years, female
2.7
GTEX-11EMC-2026-SM-5A5JV
60-69 years, female
2.6
GTEX-X4EP-2926-SM-3P5YQ
60-69 years, female
2.6
GTEX-11EM3-1326-SM-5N9C6
20-29 years, female
2.4
GTEX-13NZ9-1026-SM-5MR5K
50-59 years, male
2.4
GTEX-T2IS-1526-SM-32QPR
20-29 years, female
2.4
GTEX-132Q8-1426-SM-5EGK7
60-69 years, male
2.3
GTEX-13PL6-2926-SM-5L3I2
40-49 years, female
2.3
GTEX-VJWN-0726-SM-3GIJ8
50-59 years, female
2.3
GTEX-WYBS-0926-SM-3NM94
60-69 years, female
2.3
GTEX-131YS-0626-SM-5EGKL
60-69 years, female
2.1
GTEX-XMD1-0826-SM-4AT52
60-69 years, male
1.8
GTEX-1192X-2326-SM-5987X
50-59 years, male
1.7
GTEX-S341-1526-SM-4AD6K
40-49 years, female
1.7
GTEX-XUZC-1626-SM-4BRVP
30-39 years, female
1.7
GTEX-13FTY-2226-SM-5J1ND
40-49 years, female
1.5
GTEX-13NZB-2126-SM-5MR4Y
30-39 years, male
1.5
GTEX-YFC4-1426-SM-5IFJG
40-49 years, female
1.4
GTEX-ZC5H-2626-SM-5J2MG
40-49 years, female
1.3
GTEX-139T8-0826-SM-5L3DE
60-69 years, male
1.2
GTEX-13O3P-0826-SM-5L3DH
50-59 years, male
1.2
GTEX-R3RS-0626-SM-48FE1
40-49 years, female
1.2
GTEX-WYVS-1726-SM-3NMAY
40-49 years, female
1.2
GTEX-131XW-0726-SM-5EGK3
50-59 years, female
1.1
GTEX-ZF2S-2026-SM-5E461
50-59 years, female
1.0
GTEX-SIU7-1626-SM-4BRUK
50-59 years, male
0.8
Show all
BREAST - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.