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VEGFB
COLON - Expression summary
RNA expressioni
HPA:17.8TPM
GTEx:64.6RPKM
FANTOM5:88.8Tags Per Million

COLON - Annotated protein expression
Pending normal tissue analysis

COLON - HPA RNA-seqi
Average TPM 17.8
overview Male, age 54 Sample 1
TPM: 19.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 17.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 13.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 32.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 19
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 21.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 6.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 11.7
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 16.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 11
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 13.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 29.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 19.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seqi
Average RPKM 64.6
GTEx sample id Sample description RPKM
Colon - Sigmoid
RPKM: 89.8
Samples: 149

Max RPKM: 159.6
Min RPKM: 34.0
Std RPKM: 28.3
Median RPKM: 88.4
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 159.6
GTEX-X15G-1526-SM-4PQZM 50-59 years, female 157.8
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 155.0
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 149.8
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 146.7
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 145.9
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 143.5
GTEX-1212Z-1826-SM-5FQSH 60-69 years, male 138.6
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 138.4
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 137.1
Show all
Colon - Transverse
RPKM: 45.6
Samples: 196

Max RPKM: 141.2
Min RPKM: 11.7
Std RPKM: 27.1
Median RPKM: 39.4
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 141.2
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 124.6
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 113.0
GTEX-11GSP-1626-SM-5986N 60-69 years, female 108.9
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 108.3
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 107.8
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 101.1
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 99.5
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 99.1
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 99.1
Show all

COLON - FANTOM5 CAGEi
Average Tags Per Million 88.8
FANTOM5 sample id Sample description Tags Per Million
Colon
Tags Per Million: 77.4
FF:10014-101C5 62,83,84 years, mixed 88.8

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.