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RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Neuronal cells: 35 Glial cells and endothelial cells: 65
Male, age 70
Sample 3 TPM: 34.9
Cell types%
Neuronal cells: 35 Glial cells and endothelial cells: 65
CEREBRAL CORTEX - GTEx RNA-seqi
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 77.7
Min RPKM: 23.6
Std RPKM: 11.5
Median RPKM: 47.4
GTEX-11TTK-2926-SM-5PNYP
60-69 years, female
77.7
GTEX-1445S-3026-SM-5O9BR
60-69 years, male
77.4
GTEX-ZE7O-3126-SM-5HL5X
50-59 years, female
76.2
GTEX-1192X-3126-SM-5N9BY
50-59 years, male
73.8
GTEX-147GR-3026-SM-5S2ML
60-69 years, male
73.1
GTEX-11OC5-0726-SM-5P9JK
60-69 years, male
72.5
GTEX-13JUV-2926-SM-5LZX7
40-49 years, female
72.3
GTEX-11GSP-3226-SM-5986O
60-69 years, female
68.5
GTEX-11EMC-3226-SM-5EGKW
60-69 years, female
68.4
GTEX-Y111-2726-SM-4TT3N
50-59 years, male
66.8
GTEX-13OVJ-2826-SM-5L3GW
50-59 years, female
66.4
GTEX-13NYB-3026-SM-5IJD7
40-49 years, male
65.6
GTEX-13IVO-2926-SM-5L3CZ
70-79 years, male
63.6
GTEX-145MG-3026-SM-5RQJA
50-59 years, male
63.3
GTEX-1117F-3226-SM-5N9CT
60-69 years, female
63.2
GTEX-13JVG-3126-SM-5L3FH
60-69 years, male
62.7
GTEX-13S7M-3126-SM-5RQJQ
60-69 years, female
62.1
GTEX-11NV4-2126-SM-5N9DS
60-69 years, male
61.4
GTEX-13QIC-2926-SM-5J2NF
60-69 years, female
60.5
GTEX-1399T-3026-SM-5KLZC
60-69 years, male
60.3
GTEX-13OW7-3026-SM-5L3GY
50-59 years, male
60.0
GTEX-PWO3-0926-SM-2I5EY
60-69 years, female
59.8
GTEX-12ZZW-2926-SM-5LZUP
50-59 years, male
59.2
GTEX-12WSD-3126-SM-5HL7P
60-69 years, female
58.9
GTEX-13OW6-3026-SM-5J2MI
50-59 years, male
58.7
GTEX-11GS4-3126-SM-5A5LH
60-69 years, male
58.4
GTEX-145MF-2726-SM-5O995
50-59 years, male
58.4
GTEX-X585-3026-SM-46MWF
50-59 years, male
58.0
GTEX-13OW8-2826-SM-5L3GC
60-69 years, male
56.8
GTEX-13O3Q-2926-SM-5KM45
50-59 years, male
56.6
GTEX-ZVT3-3026-SM-5E43N
60-69 years, female
56.4
GTEX-11GSO-2926-SM-5HL73
60-69 years, male
55.3
GTEX-14ASI-3026-SM-5S2PN
60-69 years, male
54.6
GTEX-QVUS-2826-SM-3GADB
60-69 years, female
54.1
GTEX-Y8DK-0826-SM-4TT3T
60-69 years, male
54.0
GTEX-131XW-3126-SM-5LZUC
50-59 years, female
53.8
GTEX-11EI6-3026-SM-5GZZO
60-69 years, male
52.6
GTEX-Q2AG-2926-SM-2HMJ3
40-49 years, female
52.3
GTEX-13X6J-3026-SM-5Q5CU
50-59 years, male
52.2
GTEX-12ZZZ-3026-SM-5BC67
60-69 years, male
52.0
GTEX-13SLX-3126-SM-5S2Q5
50-59 years, female
52.0
GTEX-13PL6-3126-SM-5LUAR
40-49 years, female
51.7
GTEX-13X6K-2926-SM-5Q5D5
60-69 years, female
51.0
GTEX-13G51-3026-SM-5IJB8
60-69 years, male
50.7
GTEX-YJ89-3026-SM-5IFJI
60-69 years, male
50.2
GTEX-11WQK-3026-SM-5EQL6
50-59 years, male
49.8
GTEX-N7MT-1126-SM-5SI7V
60-69 years, female
49.3
GTEX-12ZZY-3026-SM-5GCOU
60-69 years, male
48.6
GTEX-11ONC-2926-SM-5P9JM
60-69 years, male
48.4
GTEX-OXRN-2426-SM-2I5EQ
50-59 years, male
48.4
GTEX-13VXU-2926-SM-5LU5C
50-59 years, male
48.3
GTEX-144FL-3026-SM-5O99C
50-59 years, male
48.3
GTEX-R55F-1326-SM-5S2V4
50-59 years, male
48.3
GTEX-XLM4-3026-SM-4AT6L
60-69 years, male
48.1
GTEX-13OVH-3026-SM-5MR4N
70-79 years, male
47.8
GTEX-12ZZX-2926-SM-5GCOQ
40-49 years, female
47.7
GTEX-14BMV-3026-SM-5S2PQ
50-59 years, male
47.5
GTEX-11PRG-2926-SM-5987A
50-59 years, male
47.4
GTEX-13O3O-3126-SM-5KM3H
60-69 years, female
46.8
GTEX-12WSC-3026-SM-5GCNF
50-59 years, male
46.7
GTEX-13PVQ-3026-SM-5SI93
50-59 years, male
46.5
GTEX-11O72-2926-SM-5BC4V
40-49 years, male
46.4
GTEX-144GL-3026-SM-5Q5CW
50-59 years, male
46.1
GTEX-Z93S-2926-SM-57WB9
50-59 years, male
46.0
GTEX-111FC-3126-SM-5GZZ2
60-69 years, male
45.9
GTEX-X4XX-3026-SM-3NMB2
60-69 years, male
45.8
GTEX-12126-1026-SM-5P9JJ
20-29 years, male
45.5
GTEX-WVLH-3026-SM-3MJG9
50-59 years, male
45.4
GTEX-1128S-2726-SM-5H12C
60-69 years, female
45.3
GTEX-145LS-3126-SM-5Q5BY
60-69 years, female
45.2
GTEX-13FHP-3026-SM-5IJBS
50-59 years, male
45.0
GTEX-117XS-3026-SM-5N9CA
60-69 years, male
44.9
GTEX-RU72-3026-SM-5SI7Y
50-59 years, female
44.8
GTEX-13FLW-1426-SM-5K7YE
50-59 years, male
44.7
GTEX-QVJO-1426-SM-2S1QY
60-69 years, female
44.4
GTEX-14A5I-2926-SM-5Q5CQ
50-59 years, female
44.3
GTEX-WZTO-2926-SM-3NM9I
40-49 years, male
44.1
GTEX-11NUK-2926-SM-5A5MD
50-59 years, male
44.0
GTEX-13FHO-3026-SM-5J1O9
60-69 years, male
43.2
GTEX-YFC4-3126-SM-5PNV6
40-49 years, female
43.2
GTEX-WWYW-3126-SM-3NB39
50-59 years, female
43.1
GTEX-NPJ7-2726-SM-2I3FT
60-69 years, female
42.7
GTEX-11DXY-3226-SM-5GIDE
60-69 years, male
42.3
GTEX-ZAK1-3026-SM-5S2MJ
50-59 years, female
42.3
GTEX-12WSA-2926-SM-5EQ4D
60-69 years, male
42.2
GTEX-12WSH-3026-SM-5CVNI
50-59 years, male
42.0
GTEX-ZZPT-3026-SM-5GZXH
50-59 years, male
42.0
GTEX-131YS-3126-SM-5KLYT
60-69 years, female
41.6
GTEX-145MH-3026-SM-5Q5DZ
50-59 years, male
41.4
GTEX-1313W-3126-SM-5LZUI
50-59 years, female
41.2
GTEX-ZUA1-3026-SM-59HJC
40-49 years, male
41.0
GTEX-11DXW-1126-SM-5H12Q
40-49 years, male
40.9
GTEX-T5JC-2426-SM-3NMDB
20-29 years, male
40.8
GTEX-139T8-1026-SM-5J2MC
60-69 years, male
40.7
GTEX-ZAJG-3126-SM-5HL9J
50-59 years, female
40.7
GTEX-XOTO-3026-SM-4B65M
50-59 years, male
40.3
GTEX-ZYFD-3026-SM-5E44C
50-59 years, male
40.1
GTEX-RNOR-2326-SM-2TF4I
50-59 years, female
39.5
GTEX-13NYS-3126-SM-5KLYV
60-69 years, male
39.1
GTEX-13FXS-3126-SM-5J2NN
50-59 years, male
38.3
GTEX-13NYC-2826-SM-5K7WR
60-69 years, male
37.7
GTEX-T6MN-2626-SM-32PMQ
50-59 years, male
37.4
GTEX-WL46-2926-SM-3LK82
50-59 years, male
36.0
GTEX-132Q8-3026-SM-5PNVG
60-69 years, male
34.8
GTEX-NPJ8-1526-SM-2D7VU
40-49 years, male
33.8
GTEX-11ZUS-2926-SM-5FQSL
30-39 years, male
32.8
GTEX-QDT8-2926-SM-32PKC
30-39 years, female
31.5
GTEX-WHSE-3026-SM-3P5ZH
20-29 years, male
31.5
GTEX-T2IS-3026-SM-32QPM
20-29 years, female
30.2
GTEX-QMR6-1426-SM-32PLA
50-59 years, male
28.9
GTEX-UTHO-3026-SM-3GAFB
60-69 years, male
27.7
GTEX-TSE9-3026-SM-3DB76
60-69 years, female
24.4
GTEX-PVOW-2526-SM-2XCF7
40-49 years, male
23.8
GTEX-11OF3-2926-SM-5HL78
60-69 years, male
23.6
Show all
Brain - Frontal Cortex (BA9) RPKM: 43.4
Samples: 108
Max RPKM: 90.8
Min RPKM: 14.5
Std RPKM: 12.3
Median RPKM: 40.8
GTEX-12WSD-0011-R10b-SM-5GU79
60-69 years, female
90.8
GTEX-13JUV-0011-R10b-SM-5LZXR
40-49 years, female
81.5
GTEX-13SLW-0011-R10a-SM-5S2UI
70-79 years, male
72.9
GTEX-13JVG-0011-R10b-SM-5KM2P
60-69 years, male
68.3
GTEX-1445S-0011-R10a-SM-5PNWB
60-69 years, male
68.3
GTEX-11WQC-0011-R10a-SM-57WCT
60-69 years, male
67.7
GTEX-ZV68-0011-R10a-SM-51MT7
50-59 years, female
66.3
GTEX-1477Z-0011-R10b-SM-5S2RF
60-69 years, male
66.2
GTEX-139TS-0011-R10a-SM-5K7TU
60-69 years, male
65.0
GTEX-13FLV-0011-R10b-SM-5LZZ2
50-59 years, male
62.7
GTEX-13OW6-0011-R10a-SM-5L3HE
50-59 years, male
62.7
GTEX-13NYB-0011-R10a-SM-5KM43
40-49 years, male
58.8
GTEX-13OVJ-0011-R10b-SM-5L3HT
50-59 years, female
58.3
GTEX-11GSP-0011-R10a-SM-5NQ7J
60-69 years, female
57.4
GTEX-147GR-0011-R10b-SM-5S2UM
60-69 years, male
57.1
GTEX-13O3O-0011-R10a-SM-5LUA9
60-69 years, female
55.7
GTEX-131XW-0011-R10a-SM-5DUVA
50-59 years, female
54.0
GTEX-ZE7O-0011-R10a-SM-57WAZ
50-59 years, female
53.5
GTEX-ZXG5-0011-R10a-SM-57WDD
60-69 years, male
52.1
GTEX-12ZZY-0011-R10b-SM-5HL7W
60-69 years, male
51.6
GTEX-13FXS-0011-R10a-SM-5J2MA
50-59 years, male
51.3
GTEX-13OW8-0011-R10a-SM-5L3H6
60-69 years, male
51.3
GTEX-12ZZZ-0011-R10a-SM-5P9HC
60-69 years, male
50.5
GTEX-13OW7-0011-R10a-SM-5L3H3
50-59 years, male
50.4
GTEX-12ZZW-0011-R10b-SM-5HL9X
50-59 years, male
49.1
GTEX-N7MT-0011-R10A-SM-2I3E1
60-69 years, female
49.0
GTEX-11WQK-0011-R10a-SM-5BC6R
50-59 years, male
48.7
GTEX-12WSC-0011-R10a-SM-5GU57
50-59 years, male
48.4
GTEX-ZUA1-0011-R10a-SM-51MT6
40-49 years, male
48.1
GTEX-14ASI-0011-R10b-SM-5S2VZ
60-69 years, male
48.0
GTEX-X261-0011-R10B-SM-4E3JT
50-59 years, male
48.0
GTEX-Z93S-0011-R10a-SM-4RGNM
50-59 years, male
47.9
GTEX-13OVL-0011-R10a-SM-5L3GS
50-59 years, male
47.8
GTEX-14753-0011-R10b-SM-5S2WE
60-69 years, male
47.4
GTEX-13SLX-0011-R10a-SM-5P9HV
50-59 years, female
47.3
GTEX-145LU-0011-R10a-SM-5PNWJ
50-59 years, male
46.7
GTEX-14BIN-0011-R10a-SM-5S2UA
50-59 years, female
46.6
GTEX-13G51-0011-R10b-SM-5LZYF
60-69 years, male
46.0
GTEX-13IVO-0011-R10a-SM-5LZY3
70-79 years, male
45.7
GTEX-147F4-0011-R10b-SM-5S2WC
50-59 years, male
45.7
GTEX-ZVT3-0011-R10b-SM-57WB6
60-69 years, female
45.7
GTEX-13NZA-0011-R10b-SM-5KM54
60-69 years, male
45.4
GTEX-NL4W-0011-R10A-SM-2I3DY
50-59 years, male
45.4
GTEX-ZAB4-0011-R10a-SM-4SOKH
40-49 years, male
44.9
GTEX-13FTZ-0011-R10b-SM-5KLZS
60-69 years, male
44.7
GTEX-ZDXO-0011-R10a-SM-4WWD8
60-69 years, male
43.1
GTEX-12WSA-0011-R10b-SM-5P9ET
60-69 years, male
42.1
GTEX-12WSM-0011-R10a-SM-5DUWV
60-69 years, male
42.1
GTEX-13NYS-0011-R10a-SM-5MR4S
60-69 years, male
41.7
GTEX-12126-0011-R10b-SM-5BC6T
20-29 years, male
41.6
GTEX-RVPU-0011-R10A-SM-2XCAH
50-59 years, male
41.5
GTEX-N7MS-0011-R10A-SM-2HMJK
60-69 years, male
41.2
GTEX-11ZUS-0011-R10b-SM-5BC79
30-39 years, male
41.0
GTEX-YJ89-0011-R10a-SM-4SOK9
60-69 years, male
40.9
GTEX-13O3Q-0011-R10b-SM-5KM39
50-59 years, male
40.8
GTEX-13QIC-0011-R10a-SM-5O9C7
60-69 years, female
40.7
GTEX-13S7M-0011-R10b-SM-5PNZB
60-69 years, female
40.3
GTEX-ZVZQ-0011-R10b-SM-51MRT
60-69 years, female
40.0
GTEX-13N2G-0011-R10a-SM-5MR34
60-69 years, male
39.7
GTEX-13RTJ-0011-R10b-SM-5O9CW
60-69 years, male
39.7
GTEX-11H98-0011-R10b-SM-5NQ98
50-59 years, male
39.6
GTEX-14BIL-0011-R10a-SM-5SI75
50-59 years, male
39.4
GTEX-13N1W-0011-R10b-SM-5MR4H
70-79 years, male
39.3
GTEX-13X6J-0011-R10b-SM-5PNWA
50-59 years, male
39.1
GTEX-XMD1-0011-R10A-SM-4AT4A
60-69 years, male
39.1
GTEX-Y8DK-0011-R10A-SM-4SOK1
60-69 years, male
39.0
GTEX-131YS-0011-R10b-SM-5EQ5N
60-69 years, female
38.9
GTEX-12WSH-0011-R10a-SM-5LZUS
50-59 years, male
38.7
GTEX-145MG-0011-R10a-SM-5PNWG
50-59 years, male
38.7
GTEX-12WSF-0011-R10a-SM-5LZVH
70-79 years, male
38.3
GTEX-OXRO-0011-R10A-SM-2I5EH
60-69 years, female
38.2
GTEX-13X6I-0011-R10a-SM-5PNWI
60-69 years, male
37.9
GTEX-12ZZX-0011-R10b-SM-5DUWK
40-49 years, female
37.3
GTEX-ZF28-0011-R10a-SM-4WWEH
60-69 years, male
37.1
GTEX-131XH-0011-R10a-SM-5EGLJ
50-59 years, male
37.0
GTEX-OXRN-0011-R10A-SM-2I5GC
50-59 years, male
37.0
GTEX-T5JC-0011-R10A-SM-32PM2
20-29 years, male
36.6
GTEX-13FHO-0011-R10b-SM-5J2MM
60-69 years, male
36.5
GTEX-XLM4-0011-R10A-SM-4AT5P
60-69 years, male
36.5
GTEX-X4XX-0011-R10B-SM-46MWO
60-69 years, male
36.4
GTEX-13X6K-0011-R10a-SM-5P9JR
60-69 years, female
36.3
GTEX-13FLW-0011-R10b-SM-5LZZF
50-59 years, male
35.4
GTEX-145LS-0011-R10a-SM-5PNUQ
60-69 years, female
34.8
GTEX-13QJC-0011-R10a-SM-5SI63
60-69 years, female
34.7
GTEX-X585-0011-R10A-SM-46MUY
50-59 years, male
34.0
GTEX-YFC4-0011-R10a-SM-4SOK5
40-49 years, female
33.6
GTEX-WWYW-0011-R10A-SM-3NB35
50-59 years, female
33.3
GTEX-NPJ8-0011-R10A-SM-2YUMO
40-49 years, male
33.1
GTEX-13CZV-0011-R10b-SM-5LZYD
60-69 years, male
33.0
GTEX-Q2AG-0011-R10A-SM-2HMLA
40-49 years, female
32.6
GTEX-WZTO-0011-R10B-SM-4E3KB
40-49 years, male
32.5
GTEX-1313W-0011-R10b-SM-5DUXA
50-59 years, female
32.4
GTEX-145MH-0011-R10b-SM-5PNUK
50-59 years, male
31.8
GTEX-P44H-0011-R10A-SM-2XCEK
40-49 years, male
31.7
GTEX-QVJO-0011-R10A-SM-2S1QJ
60-69 years, female
31.1
GTEX-12WSE-0011-R10b-SM-5P9JV
20-29 years, male
30.9
GTEX-TSE9-0011-R10A-SM-3DB7O
60-69 years, female
30.9
GTEX-X4EP-0011-R10B-SM-4QASJ
60-69 years, female
29.1
GTEX-132Q8-0011-R10b-SM-5DUWZ
60-69 years, male
29.0
GTEX-NL3H-0011-R10A-SM-2I3E9
60-69 years, male
28.7
GTEX-QVUS-0011-R10A-SM-3GIK3
60-69 years, female
28.5
GTEX-S7SE-0011-R10A-SM-2XCDF
50-59 years, male
28.0
GTEX-QMR6-0011-R10A-SM-32PKO
50-59 years, male
27.5
GTEX-T6MN-0011-R10A-SM-32QP7
50-59 years, male
27.5
GTEX-WVLH-0011-R10A-SM-3MJFM
50-59 years, male
26.1
GTEX-WL46-0011-R10A-SM-3MJFQ
50-59 years, male
24.2
GTEX-NPJ7-0011-R10A-SM-2I3E5
60-69 years, female
24.1
GTEX-QDT8-0011-R10A-SM-32PKG
30-39 years, female
14.5
Show all
CEREBRAL CORTEX - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.
The Human Protein Atlas project is funded
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Male, age 5
