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The protein expression bar, with the units not detected (n), low (l), medium (m) and high (h), is based on a best estimate of the true protein expression for proteins where the antibody staining pattern has been analyzed by knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. For details, see Assays & annotation.
h
m
l
n
RNA expressioni
RNA expression shows average values based on RNA-seq data generated by HPA, the Genotype-Tissue Expression (GTEx) consortium or the FANTOM5 consortium.
The detailed normal tissue page shows images of the stained tissue, together with antibody staining and expression level of the cell types. A knowledge-based annotated protein expression is provided for each cell type at the top of the page and the staining level of the individual antibodies is given underneath each antibody ID.
Samples from up to three different individuals have been stained for each antibody. The gender, age and tissue characterization are reported for each individual (patient) and are viewable when clicking on the image for magnification.
The images can be clicked for an enlarged view that can be panned. From the enlarged view, all stained images for all antibodies can be browsed (represented by miniature images). The miniature image with an orange overlay is the currently displayed image.
This score describes the level of antibody staining observed in the annotated cell types as not detected, low, medium, or high. It is based on the staining intensity and fraction of stained cells.
The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.
Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. TPM (transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
RNA-Seq data is reported as average RPKM (reads per kilobase per million mapped reads), generated by the Genotype-Tissue Expression (GTEx) project. More information can be found on the GTEx portal.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
Max RPKM: 1535.1
Min RPKM: 118.2
Std RPKM: 245.6
Median RPKM: 724.2
GTEX-P4QS-0926-SM-48TBS
60-69 years, male
1535.1
GTEX-U3ZN-0126-SM-4DXUM
30-39 years, female
1327.0
GTEX-S3XE-0626-SM-4AD6B
50-59 years, male
1249.5
GTEX-12WSN-0126-SM-5DUX5
40-49 years, male
1246.8
GTEX-UJHI-0126-SM-4IHLP
50-59 years, female
1222.5
GTEX-ZDTT-1026-SM-5KM19
60-69 years, male
1203.2
GTEX-U4B1-0526-SM-4DXTK
40-49 years, male
1159.9
GTEX-VJYA-0126-SM-4KL1P
60-69 years, male
1159.3
GTEX-OIZH-0926-SM-48TBR
50-59 years, male
1122.2
GTEX-RUSQ-0126-SM-47JWV
50-59 years, male
1121.7
GTEX-XV7Q-0126-SM-4BRVK
40-49 years, female
1114.9
GTEX-Y3I4-0126-SM-4TT26
50-59 years, male
1110.7
GTEX-13S86-0126-SM-5S2PI
40-49 years, male
1046.9
GTEX-QDVN-0526-SM-48TZ4
50-59 years, male
1008.8
GTEX-PLZ6-0126-SM-48TC6
30-39 years, male
997.2
GTEX-ZVZP-0726-SM-59HKA
50-59 years, male
985.1
GTEX-13X6H-0726-SM-5Q5BX
50-59 years, female
982.5
GTEX-11EQ9-0426-SM-5A5JY
30-39 years, male
962.5
GTEX-W5WG-0626-SM-4SOID
50-59 years, female
957.6
GTEX-ZPU1-1026-SM-4YCEQ
40-49 years, male
944.0
GTEX-S4Z8-0226-SM-4AD5K
60-69 years, male
943.8
GTEX-POMQ-0126-SM-48TD6
20-29 years, female
937.1
GTEX-13111-0126-SM-5EGHO
50-59 years, male
928.9
GTEX-U3ZH-0126-SM-4DXUK
30-39 years, male
920.9
GTEX-YB5K-1926-SM-4VDT4
40-49 years, female
897.2
GTEX-ZYWO-0226-SM-5GZX3
40-49 years, female
889.6
GTEX-WHWD-0126-SM-4OORS
50-59 years, male
868.3
GTEX-11LCK-0126-SM-5A5M5
30-39 years, male
859.7
GTEX-PW2O-0126-SM-48TC8
20-29 years, male
858.9
GTEX-ZAB5-0526-SM-5CVMU
50-59 years, male
856.6
GTEX-Q734-0226-SM-48U1A
40-49 years, female
855.5
GTEX-144GN-2126-SM-5O99D
50-59 years, male
851.0
GTEX-WFON-0126-SM-4LVM9
40-49 years, male
836.2
GTEX-145MN-0126-SM-5RQHY
30-39 years, male
826.6
GTEX-ZZPU-0126-SM-5E446
50-59 years, female
825.3
GTEX-12WSJ-0526-SM-5GCOZ
40-49 years, female
820.4
GTEX-11NSD-0426-SM-5N9CR
20-29 years, male
816.1
GTEX-13PL7-1126-SM-5MR5O
60-69 years, female
812.1
GTEX-O5YT-0926-SM-48TDG
20-29 years, male
810.2
GTEX-139YR-0426-SM-5IFFV
50-59 years, male
808.9
GTEX-ZLWG-0426-SM-4WWFA
50-59 years, female
806.5
GTEX-14E6E-1226-SM-5S2R5
30-39 years, male
801.3
GTEX-ZLFU-0526-SM-4WWBN
40-49 years, male
801.3
GTEX-QMRM-0226-SM-4R1K7
50-59 years, male
801.0
GTEX-13PVR-0326-SM-5RQJY
60-69 years, female
764.1
GTEX-QCQG-0226-SM-48U28
50-59 years, female
763.1
GTEX-X4LF-0226-SM-4QAS8
50-59 years, male
757.4
GTEX-139T6-0226-SM-5IFGZ
50-59 years, male
747.7
GTEX-132QS-0226-SM-5IFFZ
60-69 years, male
738.9
GTEX-12BJ1-0726-SM-5EGGF
60-69 years, male
738.8
GTEX-1122O-0526-SM-5N9DM
60-69 years, female
732.7
GTEX-P4PP-0926-SM-48TBZ
30-39 years, female
724.5
GTEX-T5JW-0126-SM-4DM6K
20-29 years, female
723.9
GTEX-13N11-0126-SM-5KM2Z
50-59 years, female
721.6
GTEX-ZV6S-0826-SM-5NQ6Z
40-49 years, female
718.1
GTEX-YEC4-0126-SM-4W21T
40-49 years, male
700.6
GTEX-XPVG-0626-SM-4B65B
50-59 years, male
698.8
GTEX-XUJ4-0226-SM-4BOP8
60-69 years, female
688.5
GTEX-14DAR-0326-SM-5S2PS
50-59 years, male
686.3
GTEX-1211K-0426-SM-5FQTP
60-69 years, female
679.7
GTEX-XAJ8-0126-SM-47JYG
40-49 years, male
679.2
GTEX-ZYFG-0726-SM-5GIDX
60-69 years, female
674.7
GTEX-QLQW-0126-SM-447BK
30-39 years, male
671.1
GTEX-146FQ-0626-SM-5LU9U
30-39 years, male
670.2
GTEX-QV31-0126-SM-447BP
30-39 years, male
660.5
GTEX-X3Y1-0126-SM-4PQZA
40-49 years, male
658.6
GTEX-11P81-1326-SM-5GU5S
30-39 years, female
652.7
GTEX-QV44-0126-SM-4R1KH
50-59 years, male
651.9
GTEX-Y5LM-0326-SM-4VBRN
40-49 years, female
647.0
GTEX-1399S-0226-SM-5IFFG
30-39 years, female
637.1
GTEX-147F3-0126-SM-5NQBJ
50-59 years, female
637.1
GTEX-YFCO-0926-SM-5LUA5
40-49 years, male
635.9
GTEX-13VXT-1326-SM-5LU3Y
20-29 years, female
633.6
GTEX-Y8LW-0126-SM-4VBS1
50-59 years, female
633.6
GTEX-13CF3-0226-SM-5J1NW
60-69 years, female
632.9
GTEX-R55G-0226-SM-48FEI
40-49 years, female
629.7
GTEX-YB5E-0426-SM-5IFHR
40-49 years, male
624.0
GTEX-11XUK-0426-SM-5EQML
40-49 years, female
622.9
GTEX-UPK5-1626-SM-4JBHI
40-49 years, male
617.5
GTEX-OOBJ-0926-SM-48TDO
60-69 years, male
614.3
GTEX-13FH7-1326-SM-5IFG8
50-59 years, female
609.6
GTEX-Z9EW-0726-SM-5HL9H
40-49 years, male
601.4
GTEX-XMK1-0126-SM-4B65F
40-49 years, male
583.7
GTEX-11VI4-0126-SM-5GU6Z
40-49 years, female
524.5
GTEX-Y114-0726-SM-4TT6U
50-59 years, female
522.5
GTEX-13U4I-1626-SM-5IFFR
40-49 years, female
514.9
GTEX-PX3G-0926-SM-48U12
20-29 years, female
498.9
GTEX-146FR-1926-SM-5NQA6
60-69 years, female
496.6
GTEX-117YX-2126-SM-5GIEL
50-59 years, male
495.6
GTEX-131XG-0426-SM-5IFGD
50-59 years, female
495.6
GTEX-Y3IK-0126-SM-4WWE9
50-59 years, female
484.8
GTEX-XQ8I-1726-SM-4BOQB
50-59 years, male
470.9
GTEX-11DXX-0726-SM-5H12X
60-69 years, female
469.5
GTEX-XGQ4-0126-SM-4AT4H
50-59 years, male
462.4
GTEX-ZVP2-0526-SM-51MSC
50-59 years, male
461.8
GTEX-Q2AH-0226-SM-48U1I
40-49 years, male
451.6
GTEX-1399R-0226-SM-5IJGG
30-39 years, male
440.0
GTEX-11P7K-0426-SM-5BC5H
30-39 years, male
427.2
GTEX-12WSK-0126-SM-5GCO7
40-49 years, female
371.1
GTEX-ZP4G-0326-SM-4YCEF
20-29 years, female
340.4
GTEX-131XE-1126-SM-5EGHW
50-59 years, male
325.1
GTEX-XXEK-0126-SM-4BRVU
50-59 years, male
308.1
GTEX-12WSG-0926-SM-5EGIH
50-59 years, female
227.0
GTEX-X585-1826-SM-4QAS3
50-59 years, male
118.2
Show all
SPLEEN - FANTOM5 CAGEi
Tissue data obtained through Cap Analysis of Gene Expression (CAGE) are reported as Tags Per Million, generated by the FANTOM5 project. More information can be found here.